Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.92■□□□□ 0.94
FEN1P39748 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.92■□□□□ 0.94
FEN1P39748 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FEN1P39748 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FEN1P39748 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
FEN1P39748 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FEN1P39748 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
FEN1P39748 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.91■□□□□ 0.94
FEN1P39748 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FEN1P39748 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FEN1P39748 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.91■□□□□ 0.94
FEN1P39748 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.91■□□□□ 0.94
FEN1P39748 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.91■□□□□ 0.94
FEN1P39748 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.91■□□□□ 0.94
FEN1P39748 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
FEN1P39748 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.91■□□□□ 0.94
FEN1P39748 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
FEN1P39748 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FEN1P39748 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FEN1P39748 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FEN1P39748 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FEN1P39748 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
FEN1P39748 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.9■□□□□ 0.94
FEN1P39748 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FEN1P39748 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.9■□□□□ 0.94
FEN1P39748 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FEN1P39748 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.9■□□□□ 0.94
FEN1P39748 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.9■□□□□ 0.94
FEN1P39748 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
FEN1P39748 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FEN1P39748 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FEN1P39748 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FEN1P39748 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FEN1P39748 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.9■□□□□ 0.94
FEN1P39748 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FEN1P39748 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
FEN1P39748 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
FEN1P39748 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FEN1P39748 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.89■□□□□ 0.93
FEN1P39748 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.89■□□□□ 0.93
FEN1P39748 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.89■□□□□ 0.93
FEN1P39748 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.89■□□□□ 0.93
FEN1P39748 AL512631.2-201ENST00000604634 923 ntBASIC20.89■□□□□ 0.93
FEN1P39748 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.89■□□□□ 0.93
FEN1P39748 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FEN1P39748 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.89■□□□□ 0.93
FEN1P39748 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.89■□□□□ 0.93
FEN1P39748 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
FEN1P39748 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FEN1P39748 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FEN1P39748 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FEN1P39748 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FEN1P39748 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.88■□□□□ 0.93
FEN1P39748 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.88■□□□□ 0.93
FEN1P39748 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
FEN1P39748 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.88■□□□□ 0.93
FEN1P39748 AC131212.1-201ENST00000613771 668 ntBASIC20.88■□□□□ 0.93
FEN1P39748 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FEN1P39748 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FEN1P39748 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FEN1P39748 PKD1P6-201ENST00000343738 4769 ntBASIC20.88■□□□□ 0.93
FEN1P39748 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.88■□□□□ 0.93
FEN1P39748 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FEN1P39748 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.88■□□□□ 0.93
FEN1P39748 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.87■□□□□ 0.93
FEN1P39748 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FEN1P39748 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.87■□□□□ 0.93
FEN1P39748 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FEN1P39748 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
FEN1P39748 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FEN1P39748 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.87■□□□□ 0.93
FEN1P39748 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FEN1P39748 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.87■□□□□ 0.93
FEN1P39748 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FEN1P39748 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.87■□□□□ 0.93
FEN1P39748 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
FEN1P39748 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FEN1P39748 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FEN1P39748 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.87■□□□□ 0.93
FEN1P39748 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.86■□□□□ 0.93
FEN1P39748 AL117328.2-201ENST00000624617 1940 ntBASIC20.86■□□□□ 0.93
FEN1P39748 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FEN1P39748 SRD5A1P1-201ENST00000442297 786 ntBASIC20.86■□□□□ 0.93
FEN1P39748 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.86■□□□□ 0.93
FEN1P39748 AC099791.2-201ENST00000605725 427 ntBASIC20.86■□□□□ 0.93
FEN1P39748 MIR4466-201ENST00000606121 54 ntBASIC20.86■□□□□ 0.93
FEN1P39748 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FEN1P39748 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FEN1P39748 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.86■□□□□ 0.93
FEN1P39748 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FEN1P39748 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
FEN1P39748 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
FEN1P39748 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FEN1P39748 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.85■□□□□ 0.93
FEN1P39748 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FEN1P39748 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FEN1P39748 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FEN1P39748 CLDN5-201ENST00000403084 2357 ntBASIC20.85■□□□□ 0.93
FEN1P39748 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FEN1P39748 AC009086.3-201ENST00000623486 1008 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms