Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MFSD12-215ENST00000615613 688 ntBASIC12.65□□□□□ -0.38
SCN2BO60939 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SCN2BO60939 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
SCN2BO60939 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 AC092028.1-202ENST00000641483 3547 ntBASIC12.65□□□□□ -0.38
SCN2BO60939 AC092028.1-201ENST00000641781 3540 ntBASIC12.65□□□□□ -0.38
SCN2BO60939 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SCN2BO60939 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SCN2BO60939 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC12.65□□□□□ -0.38
SCN2BO60939 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC12.65□□□□□ -0.38
SCN2BO60939 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.65□□□□□ -0.38
SCN2BO60939 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.65□□□□□ -0.39
SCN2BO60939 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SCN2BO60939 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
SCN2BO60939 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
SCN2BO60939 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SCN2BO60939 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC12.65□□□□□ -0.39
SCN2BO60939 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.64□□□□□ -0.39
SCN2BO60939 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SCN2BO60939 AC018445.4-201ENST00000624066 2291 ntBASIC12.64□□□□□ -0.39
SCN2BO60939 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 AC092115.1-201ENST00000566277 1402 ntBASIC12.64□□□□□ -0.39
SCN2BO60939 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
SCN2BO60939 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SCN2BO60939 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
SCN2BO60939 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SCN2BO60939 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.64□□□□□ -0.39
SCN2BO60939 AL512430.1-201ENST00000392575 860 ntBASIC12.64□□□□□ -0.39
SCN2BO60939 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.64□□□□□ -0.39
SCN2BO60939 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.64□□□□□ -0.39
SCN2BO60939 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.64□□□□□ -0.39
SCN2BO60939 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.64□□□□□ -0.39
SCN2BO60939 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.64□□□□□ -0.39
SCN2BO60939 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.64□□□□□ -0.39
SCN2BO60939 AL627422.1-201ENST00000434104 580 ntBASIC12.64□□□□□ -0.39
SCN2BO60939 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC12.64□□□□□ -0.39
SCN2BO60939 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC12.64□□□□□ -0.39
SCN2BO60939 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SCN2BO60939 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.64□□□□□ -0.39
SCN2BO60939 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.64□□□□□ -0.39
SCN2BO60939 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
SCN2BO60939 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 RN7SL556P-201ENST00000582856 298 ntBASIC12.64□□□□□ -0.39
SCN2BO60939 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.64□□□□□ -0.39
SCN2BO60939 AP000553.2-201ENST00000609038 441 ntBASIC12.64□□□□□ -0.39
SCN2BO60939 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.64□□□□□ -0.39
SCN2BO60939 LINC00643-207ENST00000637212 734 ntBASIC12.64□□□□□ -0.39
SCN2BO60939 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SCN2BO60939 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SCN2BO60939 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SCN2BO60939 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCN2BO60939 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.64□□□□□ -0.39
SCN2BO60939 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.63□□□□□ -0.39
SCN2BO60939 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.63□□□□□ -0.39
SCN2BO60939 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.63□□□□□ -0.39
SCN2BO60939 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SCN2BO60939 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC12.63□□□□□ -0.39
SCN2BO60939 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SCN2BO60939 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms