RNA–Protein interactions for RNA: ENST00000617178.4

POLDIP3-209, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene POLDIP3, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-209ENST00000617178 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
POLDIP3-209ENST00000617178 CCDC180Q9P1Z9 1646 aa27.06■■□□□ 1.92
POLDIP3-209ENST00000617178 ABCC9O60706 1549 aa26.27■■□□□ 1.8
POLDIP3-209ENST00000617178 DCAF8L2P0C7V8 631 aa25.85■■□□□ 1.73
POLDIP3-209ENST00000617178 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
POLDIP3-209ENST00000617178 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
POLDIP3-209ENST00000617178 NACADO15069 1562 aa25.37■■□□□ 1.65
POLDIP3-209ENST00000617178 RB1CC1Q8TDY2 1594 aa25.31■■□□□ 1.64
POLDIP3-209ENST00000617178 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
POLDIP3-209ENST00000617178 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
POLDIP3-209ENST00000617178 SHROOM4Q9ULL8 1493 aa24.92■■□□□ 1.58
POLDIP3-209ENST00000617178 UNC13AQ9UPW8 1703 aa24.8■■□□□ 1.56
POLDIP3-209ENST00000617178 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
POLDIP3-209ENST00000617178 BICRAQ9NZM4 1560 aa24.58■■□□□ 1.53
POLDIP3-209ENST00000617178 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
POLDIP3-209ENST00000617178 EIF4G1Q04637 1599 aaKnown RBP23.9■■□□□ 1.42
POLDIP3-209ENST00000617178 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
POLDIP3-209ENST00000617178 BAZ1AQ9NRL2 1556 aaPredicted RBP23.83■■□□□ 1.41
POLDIP3-209ENST00000617178 SMARCA4P51532 1647 aa23.81■■□□□ 1.4
POLDIP3-209ENST00000617178 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
POLDIP3-209ENST00000617178 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
POLDIP3-209ENST00000617178 CC2D2AQ9P2K1 1620 aa23.71■■□□□ 1.39
POLDIP3-209ENST00000617178 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
POLDIP3-209ENST00000617178 WIZO95785 1651 aa23.62■■□□□ 1.37
POLDIP3-209ENST00000617178 ATAD2BQ9ULI0 1458 aa23.59■■□□□ 1.37
POLDIP3-209ENST00000617178 SMARCA2P51531 1590 aa23.51■■□□□ 1.35
POLDIP3-209ENST00000617178 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
POLDIP3-209ENST00000617178 NCAPD3P42695 1498 aa23.45■■□□□ 1.34
POLDIP3-209ENST00000617178 BAZ1BQ9UIG0 1483 aaKnown RBP23.42■■□□□ 1.34
POLDIP3-209ENST00000617178 HMGXB3Q12766 1538 aa23.34■■□□□ 1.33
POLDIP3-209ENST00000617178 TOP2AP11388 1531 aaKnown RBP23.29■■□□□ 1.32
POLDIP3-209ENST00000617178 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
POLDIP3-209ENST00000617178 NESP48681 1621 aa22.89■■□□□ 1.25
POLDIP3-209ENST00000617178 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
POLDIP3-209ENST00000617178 CFTRP13569 1480 aa22.79■■□□□ 1.24
POLDIP3-209ENST00000617178 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
POLDIP3-209ENST00000617178 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
POLDIP3-209ENST00000617178 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
POLDIP3-209ENST00000617178 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
POLDIP3-209ENST00000617178 PRDM2Q13029 1718 aa22.56■■□□□ 1.2
POLDIP3-209ENST00000617178 KIF21AQ7Z4S6 1674 aa22.55■■□□□ 1.2
POLDIP3-209ENST00000617178 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
POLDIP3-209ENST00000617178 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
POLDIP3-209ENST00000617178 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
POLDIP3-209ENST00000617178 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
POLDIP3-209ENST00000617178 URB2Q14146 1524 aaKnown RBP22.35■■□□□ 1.17
POLDIP3-209ENST00000617178 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
POLDIP3-209ENST00000617178 CUX1P39880 1505 aa22.31■■□□□ 1.16
POLDIP3-209ENST00000617178 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
POLDIP3-209ENST00000617178 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
POLDIP3-209ENST00000617178 TOPBP1Q92547 1522 aa22.28■■□□□ 1.16
POLDIP3-209ENST00000617178 TRIM41Q8WV44 630 aa22.26■■□□□ 1.15
POLDIP3-209ENST00000617178 DNMBPQ6XZF7 1577 aa22.24■■□□□ 1.15
POLDIP3-209ENST00000617178 WDR62O43379 1518 aa22.23■■□□□ 1.15
POLDIP3-209ENST00000617178 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
POLDIP3-209ENST00000617178 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
POLDIP3-209ENST00000617178 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
POLDIP3-209ENST00000617178 POLA1P09884 1462 aaPredicted RBP22.14■■□□□ 1.13
POLDIP3-209ENST00000617178 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
POLDIP3-209ENST00000617178 CUX2O14529 1486 aa22.09■■□□□ 1.13
POLDIP3-209ENST00000617178 SOGA1O94964 1423 aa22.08■■□□□ 1.12
POLDIP3-209ENST00000617178 HRCP23327 699 aa22.05■■□□□ 1.12
POLDIP3-209ENST00000617178 IFT140Q96RY7 1462 aa21.97■■□□□ 1.11
POLDIP3-209ENST00000617178 TARBP1Q13395 1621 aaKnown RBP21.97■■□□□ 1.11
POLDIP3-209ENST00000617178 TDRD9Q8NDG6 1382 aaKnown RBP21.96■■□□□ 1.11
POLDIP3-209ENST00000617178 ZNF608Q9ULD9 1512 aaPredicted RBP21.95■■□□□ 1.1
POLDIP3-209ENST00000617178 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
POLDIP3-209ENST00000617178 ABCA10Q8WWZ4 1543 aa21.91■■□□□ 1.1
POLDIP3-209ENST00000617178 AQRO60306 1485 aaKnown RBP eCLIP21.91■■□□□ 1.13e-7■■■■■ 39.4
POLDIP3-209ENST00000617178 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
POLDIP3-209ENST00000617178 WDR97A6NE52 1622 aa21.87■■□□□ 1.09
POLDIP3-209ENST00000617178 KIF27Q86VH2 1401 aa21.82■■□□□ 1.08
POLDIP3-209ENST00000617178 GAPVD1Q14C86 1478 aa21.81■■□□□ 1.08
POLDIP3-209ENST00000617178 EIF4G3O43432 1585 aaKnown RBP21.81■■□□□ 1.08
POLDIP3-209ENST00000617178 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.08
POLDIP3-209ENST00000617178 IGF1RP08069 1367 aa21.72■■□□□ 1.07
POLDIP3-209ENST00000617178 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
POLDIP3-209ENST00000617178 CSRNP3Q8WYN3 585 aa21.7■■□□□ 1.06
POLDIP3-209ENST00000617178 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
POLDIP3-209ENST00000617178 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.06
POLDIP3-209ENST00000617178 PBRM1Q86U86 1689 aa21.68■■□□□ 1.06
POLDIP3-209ENST00000617178 SNAPC4Q5SXM2 1469 aa21.66■■□□□ 1.06
POLDIP3-209ENST00000617178 EEA1Q15075 1411 aa21.64■■□□□ 1.06
POLDIP3-209ENST00000617178 ERICH3Q5RHP9 1530 aa21.64■■□□□ 1.05
POLDIP3-209ENST00000617178 FBLN2P98095 1184 aa21.63■■□□□ 1.05
POLDIP3-209ENST00000617178 CARMIL1Q5VZK9 1371 aa21.6■■□□□ 1.05
POLDIP3-209ENST00000617178 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
POLDIP3-209ENST00000617178 MAGI1Q96QZ7 1491 aaPredicted RBP21.56■■□□□ 1.04
POLDIP3-209ENST00000617178 FHAD1B1AJZ9 1412 aa21.54■■□□□ 1.04
POLDIP3-209ENST00000617178 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
POLDIP3-209ENST00000617178 PRXQ9BXM0 1461 aa21.52■■□□□ 1.04
POLDIP3-209ENST00000617178 CUL7Q14999 1698 aa21.51■■□□□ 1.03
POLDIP3-209ENST00000617178 SYNJ2O15056 1496 aa21.5■■□□□ 1.03
POLDIP3-209ENST00000617178 RAPGEF2Q9Y4G8 1499 aa21.5■■□□□ 1.03
POLDIP3-209ENST00000617178 PCGF6Q9BYE7 350 aa21.5■■□□□ 1.03
POLDIP3-209ENST00000617178 KIF21BO75037 1637 aa21.49■■□□□ 1.03
POLDIP3-209ENST00000617178 CHD1O14646 1710 aa21.44■■□□□ 1.02
POLDIP3-209ENST00000617178 GRIN2AQ12879 1464 aa21.44■■□□□ 1.02
POLDIP3-209ENST00000617178 UBTFP17480 764 aaKnown RBP21.43■■□□□ 1.02
POLDIP3-209ENST00000617178 GOLGA3Q08378 1498 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms