RNA–Protein interactions for RNA: ENST00000609038.1

AP000553.2-201, humanhuman

BASIC

Gene AP000553.2, Length 441 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000553.2-201ENST00000609038 NISCHQ9Y2I1 1504 aa31.76■■■□□ 2.68
AP000553.2-201ENST00000609038 AEBP2Q6ZN18 517 aaPredicted RBP29.9■■■□□ 2.38
AP000553.2-201ENST00000609038 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
AP000553.2-201ENST00000609038 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
AP000553.2-201ENST00000609038 ABCC9O60706 1549 aa26.69■■□□□ 1.86
AP000553.2-201ENST00000609038 ZCCHC6Q5VYS8 1495 aaKnown RBP26.6■■□□□ 1.85
AP000553.2-201ENST00000609038 DCAF1Q9Y4B6 1507 aa26.44■■□□□ 1.82
AP000553.2-201ENST00000609038 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.81
AP000553.2-201ENST00000609038 NACADO15069 1562 aa26.25■■□□□ 1.79
AP000553.2-201ENST00000609038 RB1CC1Q8TDY2 1594 aa26.1■■□□□ 1.77
AP000553.2-201ENST00000609038 DCAF8L2P0C7V8 631 aa25.99■■□□□ 1.75
AP000553.2-201ENST00000609038 SENP3Q9H4L4 574 aaPredicted RBP25.6■■□□□ 1.69
AP000553.2-201ENST00000609038 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
AP000553.2-201ENST00000609038 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
AP000553.2-201ENST00000609038 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
AP000553.2-201ENST00000609038 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
AP000553.2-201ENST00000609038 PHF23Q9BUL5 403 aaPredicted RBP25.2■■□□□ 1.62
AP000553.2-201ENST00000609038 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.59
AP000553.2-201ENST00000609038 BAZ1AQ9NRL2 1556 aaPredicted RBP24.6■■□□□ 1.53
AP000553.2-201ENST00000609038 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.53
AP000553.2-201ENST00000609038 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
AP000553.2-201ENST00000609038 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
AP000553.2-201ENST00000609038 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
AP000553.2-201ENST00000609038 PEG3Q9GZU2 1588 aa24.39■■□□□ 1.5
AP000553.2-201ENST00000609038 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
AP000553.2-201ENST00000609038 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
AP000553.2-201ENST00000609038 SMARCA2P51531 1590 aa24.28■■□□□ 1.48
AP000553.2-201ENST00000609038 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
AP000553.2-201ENST00000609038 WIZO95785 1651 aa24.19■■□□□ 1.46
AP000553.2-201ENST00000609038 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
AP000553.2-201ENST00000609038 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
AP000553.2-201ENST00000609038 TOP2AP11388 1531 aaKnown RBP24.04■■□□□ 1.44
AP000553.2-201ENST00000609038 BAZ1BQ9UIG0 1483 aaKnown RBP24.03■■□□□ 1.44
AP000553.2-201ENST00000609038 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
AP000553.2-201ENST00000609038 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
AP000553.2-201ENST00000609038 FOXD1Q16676 465 aa23.92■■□□□ 1.42
AP000553.2-201ENST00000609038 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
AP000553.2-201ENST00000609038 CFTRP13569 1480 aa23.47■■□□□ 1.35
AP000553.2-201ENST00000609038 LAMC3Q9Y6N6 1575 aa23.47■■□□□ 1.35
AP000553.2-201ENST00000609038 PRDM2Q13029 1718 aa23.45■■□□□ 1.34
AP000553.2-201ENST00000609038 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
AP000553.2-201ENST00000609038 NESP48681 1621 aa23.27■■□□□ 1.32
AP000553.2-201ENST00000609038 PDS5BQ9NTI5 1447 aa23.24■■□□□ 1.31
AP000553.2-201ENST00000609038 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
AP000553.2-201ENST00000609038 KIF21AQ7Z4S6 1674 aa23.12■■□□□ 1.29
AP000553.2-201ENST00000609038 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
AP000553.2-201ENST00000609038 ABCC8Q09428 1581 aa23■■□□□ 1.27
AP000553.2-201ENST00000609038 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
AP000553.2-201ENST00000609038 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
AP000553.2-201ENST00000609038 WRNQ14191 1432 aaPredicted RBP eCLIP22.95■■□□□ 1.26
AP000553.2-201ENST00000609038 THOC2Q8NI27 1593 aaKnown RBP22.94■■□□□ 1.26
AP000553.2-201ENST00000609038 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
AP000553.2-201ENST00000609038 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
AP000553.2-201ENST00000609038 POTEDQ86YR6 584 aa22.93■■□□□ 1.26
AP000553.2-201ENST00000609038 WDR62O43379 1518 aa22.92■■□□□ 1.26
AP000553.2-201ENST00000609038 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
AP000553.2-201ENST00000609038 CUX1P39880 1505 aa22.89■■□□□ 1.26
AP000553.2-201ENST00000609038 URB2Q14146 1524 aaKnown RBP22.89■■□□□ 1.26
AP000553.2-201ENST00000609038 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
AP000553.2-201ENST00000609038 SYNJ1O43426 1573 aa22.86■■□□□ 1.25
AP000553.2-201ENST00000609038 POLA1P09884 1462 aaPredicted RBP22.71■■□□□ 1.23
AP000553.2-201ENST00000609038 FGD5Q6ZNL6 1462 aa22.71■■□□□ 1.23
AP000553.2-201ENST00000609038 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
AP000553.2-201ENST00000609038 CUX2O14529 1486 aa22.68■■□□□ 1.22
AP000553.2-201ENST00000609038 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
AP000553.2-201ENST00000609038 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
AP000553.2-201ENST00000609038 WDR97A6NE52 1622 aa22.61■■□□□ 1.21
AP000553.2-201ENST00000609038 ABCA10Q8WWZ4 1543 aa22.6■■□□□ 1.21
AP000553.2-201ENST00000609038 SOGA1O94964 1423 aa22.59■■□□□ 1.21
AP000553.2-201ENST00000609038 MSH5O43196 834 aa22.58■■□□□ 1.21
AP000553.2-201ENST00000609038 RAD54L2Q9Y4B4 1467 aa22.53■■□□□ 1.2
AP000553.2-201ENST00000609038 EEA1Q15075 1411 aa22.48■■□□□ 1.19
AP000553.2-201ENST00000609038 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
AP000553.2-201ENST00000609038 KIF27Q86VH2 1401 aa22.44■■□□□ 1.18
AP000553.2-201ENST00000609038 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
AP000553.2-201ENST00000609038 ZNF608Q9ULD9 1512 aaPredicted RBP22.36■■□□□ 1.17
AP000553.2-201ENST00000609038 GAPVD1Q14C86 1478 aa22.36■■□□□ 1.17
AP000553.2-201ENST00000609038 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
AP000553.2-201ENST00000609038 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
AP000553.2-201ENST00000609038 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
AP000553.2-201ENST00000609038 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
AP000553.2-201ENST00000609038 GRIN2BQ13224 1484 aa22.31■■□□□ 1.16
AP000553.2-201ENST00000609038 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.16
AP000553.2-201ENST00000609038 CUL7Q14999 1698 aa22.28■■□□□ 1.16
AP000553.2-201ENST00000609038 PIAS4Q8N2W9 510 aaPredicted RBP22.27■■□□□ 1.16
AP000553.2-201ENST00000609038 IGF1RP08069 1367 aa22.26■■□□□ 1.15
AP000553.2-201ENST00000609038 MAGI1Q96QZ7 1491 aaPredicted RBP22.23■■□□□ 1.15
AP000553.2-201ENST00000609038 CSRNP3Q8WYN3 585 aa22.22■■□□□ 1.15
AP000553.2-201ENST00000609038 PRXQ9BXM0 1461 aa22.19■■□□□ 1.14
AP000553.2-201ENST00000609038 KIF21BO75037 1637 aa22.18■■□□□ 1.14
AP000553.2-201ENST00000609038 ADAMTS12P58397 1594 aa22.18■■□□□ 1.14
AP000553.2-201ENST00000609038 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
AP000553.2-201ENST00000609038 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
AP000553.2-201ENST00000609038 CARMIL1Q5VZK9 1371 aa22.13■■□□□ 1.13
AP000553.2-201ENST00000609038 SYNJ2O15056 1496 aa22.1■■□□□ 1.13
AP000553.2-201ENST00000609038 RAPGEF2Q9Y4G8 1499 aa22.09■■□□□ 1.13
AP000553.2-201ENST00000609038 PLPPR3Q6T4P5 718 aa22.06■■□□□ 1.12
AP000553.2-201ENST00000609038 FAM9AQ8IZU1 332 aaPredicted RBP22.05■■□□□ 1.12
AP000553.2-201ENST00000609038 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
AP000553.2-201ENST00000609038 GRIN2AQ12879 1464 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms