Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.21□□□□□ -0.13
O00370 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.21□□□□□ -0.13
O00370 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
O00370 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
O00370 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.21□□□□□ -0.14
O00370 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
O00370 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
O00370 CTAGE10P-201ENST00000318353 2408 ntBASIC14.21□□□□□ -0.14
O00370 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
O00370 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
O00370 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.21□□□□□ -0.14
O00370 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
O00370 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC14.21□□□□□ -0.14
O00370 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC14.21□□□□□ -0.14
O00370 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
O00370 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14.2□□□□□ -0.14
O00370 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
O00370 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
O00370 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
O00370 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
O00370 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.2□□□□□ -0.14
O00370 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 KRT18P4-201ENST00000422599 1288 ntBASIC14.2□□□□□ -0.14
O00370 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.2□□□□□ -0.14
O00370 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.2□□□□□ -0.14
O00370 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.2□□□□□ -0.14
O00370 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC14.2□□□□□ -0.14
O00370 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.2□□□□□ -0.14
O00370 AC092903.1-201ENST00000466506 262 ntBASIC14.2□□□□□ -0.14
O00370 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC14.2□□□□□ -0.14
O00370 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.2□□□□□ -0.14
O00370 AC090136.2-201ENST00000517809 420 ntBASIC14.2□□□□□ -0.14
O00370 AP000920.1-201ENST00000531824 344 ntBASIC14.2□□□□□ -0.14
O00370 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.2□□□□□ -0.14
O00370 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.2□□□□□ -0.14
O00370 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC14.2□□□□□ -0.14
O00370 AL451007.2-201ENST00000632004 563 ntBASIC14.2□□□□□ -0.14
O00370 HLA-C-210ENST00000640219 976 ntBASIC14.2□□□□□ -0.14
O00370 FAM90A11P-201ENST00000518378 2218 ntBASIC14.2□□□□□ -0.14
O00370 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
O00370 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
O00370 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC14.2□□□□□ -0.14
O00370 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.2□□□□□ -0.14
O00370 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC14.2□□□□□ -0.14
O00370 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.2□□□□□ -0.14
O00370 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
O00370 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC14.19□□□□□ -0.14
O00370 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
O00370 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
O00370 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
O00370 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC14.19□□□□□ -0.14
O00370 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
O00370 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
O00370 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
O00370 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.19□□□□□ -0.14
O00370 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
O00370 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
O00370 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
O00370 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.19□□□□□ -0.14
O00370 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC14.19□□□□□ -0.14
O00370 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC14.19□□□□□ -0.14
O00370 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
O00370 AC093909.3-201ENST00000504783 336 ntBASIC14.19□□□□□ -0.14
O00370 CTBP2P4-201ENST00000513884 920 ntBASIC14.19□□□□□ -0.14
O00370 AC087203.1-201ENST00000532111 1181 ntBASIC14.19□□□□□ -0.14
O00370 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.19□□□□□ -0.14
O00370 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms