RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
RUBCN-202ENST00000296343 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
RUBCN-202ENST00000296343 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
RUBCN-202ENST00000296343 CCDC180Q9P1Z9 1646 aa23.69■■□□□ 1.38
RUBCN-202ENST00000296343 SUPT5HO00267 1087 aaKnown RBP23.61■■□□□ 1.37
RUBCN-202ENST00000296343 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
RUBCN-202ENST00000296343 ABCC9O60706 1549 aa23.1■■□□□ 1.29
RUBCN-202ENST00000296343 SCRIBQ14160 1630 aa22.5■■□□□ 1.19
RUBCN-202ENST00000296343 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
RUBCN-202ENST00000296343 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
RUBCN-202ENST00000296343 NACADO15069 1562 aa22.24■■□□□ 1.15
RUBCN-202ENST00000296343 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
RUBCN-202ENST00000296343 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
RUBCN-202ENST00000296343 EHMT2Q96KQ7 1210 aa22.1■■□□□ 1.13
RUBCN-202ENST00000296343 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
RUBCN-202ENST00000296343 LOC105371045A0A1W2PR82 267 aa22.03■■□□□ 1.12
RUBCN-202ENST00000296343 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
RUBCN-202ENST00000296343 CECR2Q9BXF3 1484 aa22■■□□□ 1.11
RUBCN-202ENST00000296343 FAM9AQ8IZU1 332 aaPredicted RBP21.96■■□□□ 1.11
RUBCN-202ENST00000296343 TRIM41Q8WV44 630 aa21.79■■□□□ 1.08
RUBCN-202ENST00000296343 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
RUBCN-202ENST00000296343 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
RUBCN-202ENST00000296343 PCGF6Q9BYE7 350 aa21.62■■□□□ 1.05
RUBCN-202ENST00000296343 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
RUBCN-202ENST00000296343 WIZO95785 1651 aa21.61■■□□□ 1.05
RUBCN-202ENST00000296343 PPARGC1BQ86YN6 1023 aaKnown RBP21.35■■□□□ 1.01
RUBCN-202ENST00000296343 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1.01
RUBCN-202ENST00000296343 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
RUBCN-202ENST00000296343 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
RUBCN-202ENST00000296343 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
RUBCN-202ENST00000296343 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
RUBCN-202ENST00000296343 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
RUBCN-202ENST00000296343 TOP2AP11388 1531 aaKnown RBP21.05■□□□□ 0.96
RUBCN-202ENST00000296343 RANGAP1P46060 587 aaPredicted RBP21.04■□□□□ 0.96
RUBCN-202ENST00000296343 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
RUBCN-202ENST00000296343 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
RUBCN-202ENST00000296343 HRCP23327 699 aa20.97■□□□□ 0.95
RUBCN-202ENST00000296343 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
RUBCN-202ENST00000296343 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
RUBCN-202ENST00000296343 SOGA1O94964 1423 aa20.92■□□□□ 0.94
RUBCN-202ENST00000296343 ATAD2BQ9ULI0 1458 aa20.89■□□□□ 0.93
RUBCN-202ENST00000296343 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
RUBCN-202ENST00000296343 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
RUBCN-202ENST00000296343 RUSC2Q8N2Y8 1516 aa20.86■□□□□ 0.93
RUBCN-202ENST00000296343 CSRNP3Q8WYN3 585 aa20.76■□□□□ 0.91
RUBCN-202ENST00000296343 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
RUBCN-202ENST00000296343 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
RUBCN-202ENST00000296343 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
RUBCN-202ENST00000296343 SYNJ1O43426 1573 aa20.56■□□□□ 0.88
RUBCN-202ENST00000296343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.54■□□□□ 0.88
RUBCN-202ENST00000296343 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
RUBCN-202ENST00000296343 HMGXB3Q12766 1538 aa20.45■□□□□ 0.86
RUBCN-202ENST00000296343 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
RUBCN-202ENST00000296343 CCER1Q8TC90 406 aaPredicted RBP20.37■□□□□ 0.85
RUBCN-202ENST00000296343 RAPGEF2Q9Y4G8 1499 aa20.35■□□□□ 0.85
RUBCN-202ENST00000296343 GOLGA3Q08378 1498 aa20.34■□□□□ 0.85
RUBCN-202ENST00000296343 HNRNPUL2Q1KMD3 747 aaKnown RBP20.32■□□□□ 0.84
RUBCN-202ENST00000296343 EEA1Q15075 1411 aa20.3■□□□□ 0.84
RUBCN-202ENST00000296343 APLP2Q06481 763 aa20.28■□□□□ 0.84
RUBCN-202ENST00000296343 CLIP1P30622 1438 aa20.26■□□□□ 0.83
RUBCN-202ENST00000296343 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
RUBCN-202ENST00000296343 CUX1P39880 1505 aa20.22■□□□□ 0.83
RUBCN-202ENST00000296343 CFTRP13569 1480 aa20.2■□□□□ 0.82
RUBCN-202ENST00000296343 NESP48681 1621 aa20.2■□□□□ 0.82
RUBCN-202ENST00000296343 P3H3Q8IVL6 736 aa20.2■□□□□ 0.82
RUBCN-202ENST00000296343 CADPSQ9ULU8 1353 aa20.19■□□□□ 0.82
RUBCN-202ENST00000296343 ATP1B4Q9UN42 357 aaPredicted RBP20.18■□□□□ 0.82
RUBCN-202ENST00000296343 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
RUBCN-202ENST00000296343 CUX2O14529 1486 aa20.11■□□□□ 0.81
RUBCN-202ENST00000296343 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
RUBCN-202ENST00000296343 ITGAEP38570 1179 aa20.09■□□□□ 0.81
RUBCN-202ENST00000296343 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
RUBCN-202ENST00000296343 KANK4Q5T7N3 995 aaPredicted RBP20.05■□□□□ 0.8
RUBCN-202ENST00000296343 FANCD2Q9BXW9 1451 aa20.02■□□□□ 0.8
RUBCN-202ENST00000296343 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.79
RUBCN-202ENST00000296343 FGD5Q6ZNL6 1462 aa20■□□□□ 0.79
RUBCN-202ENST00000296343 KIF21BO75037 1637 aa20■□□□□ 0.79
RUBCN-202ENST00000296343 VPS8Q8N3P4 1428 aa19.98■□□□□ 0.79
RUBCN-202ENST00000296343 BIVM-ERCC5R4GMW8 1640 aa19.97■□□□□ 0.79
RUBCN-202ENST00000296343 IGF1RP08069 1367 aa19.97■□□□□ 0.79
RUBCN-202ENST00000296343 PRXQ9BXM0 1461 aa19.95■□□□□ 0.79
RUBCN-202ENST00000296343 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
RUBCN-202ENST00000296343 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
RUBCN-202ENST00000296343 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
RUBCN-202ENST00000296343 ARAP1Q96P48 1450 aa19.89■□□□□ 0.78
RUBCN-202ENST00000296343 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
RUBCN-202ENST00000296343 ARID3CA6NKF2 412 aa19.84■□□□□ 0.77
RUBCN-202ENST00000296343 PDS5BQ9NTI5 1447 aa19.82■□□□□ 0.76
RUBCN-202ENST00000296343 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
RUBCN-202ENST00000296343 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
RUBCN-202ENST00000296343 TOPBP1Q92547 1522 aa19.77■□□□□ 0.76
RUBCN-202ENST00000296343 ARHGAP35Q9NRY4 1499 aa19.77■□□□□ 0.76
RUBCN-202ENST00000296343 ERICH3Q5RHP9 1530 aa19.75■□□□□ 0.75
RUBCN-202ENST00000296343 FAM50AQ14320 339 aaKnown RBP19.74■□□□□ 0.75
RUBCN-202ENST00000296343 URB2Q14146 1524 aaKnown RBP19.71■□□□□ 0.75
RUBCN-202ENST00000296343 FHOD3Q2V2M9 1422 aa19.7■□□□□ 0.74
RUBCN-202ENST00000296343 PRDM2Q13029 1718 aa19.7■□□□□ 0.74
RUBCN-202ENST00000296343 THOC2Q8NI27 1593 aaKnown RBP19.65■□□□□ 0.74
RUBCN-202ENST00000296343 DNMBPQ6XZF7 1577 aa19.64■□□□□ 0.73
RUBCN-202ENST00000296343 FBLN2P98095 1184 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms