RNA–Protein interactions for RNA: ENST00000358011.8

C1orf109-201, Transcript of chromosome 1 open reading frame 109, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C1orf109, Length 2,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf109-201ENST00000358011 NISCHQ9Y2I1 1504 aa29.67■■■□□ 2.34
C1orf109-201ENST00000358011 CCDC180Q9P1Z9 1646 aa25.8■■□□□ 1.72
C1orf109-201ENST00000358011 ZCCHC6Q5VYS8 1495 aaKnown RBP24.85■■□□□ 1.57
C1orf109-201ENST00000358011 ABCC9O60706 1549 aa24.83■■□□□ 1.57
C1orf109-201ENST00000358011 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
C1orf109-201ENST00000358011 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
C1orf109-201ENST00000358011 SHROOM4Q9ULL8 1493 aa24.35■■□□□ 1.49
C1orf109-201ENST00000358011 MYO15BQ96JP2 1530 aa24.1■■□□□ 1.45
C1orf109-201ENST00000358011 NACADO15069 1562 aa24.1■■□□□ 1.45
C1orf109-201ENST00000358011 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
C1orf109-201ENST00000358011 SCRIBQ14160 1630 aa23.93■■□□□ 1.42
C1orf109-201ENST00000358011 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
C1orf109-201ENST00000358011 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
C1orf109-201ENST00000358011 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.34
C1orf109-201ENST00000358011 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
C1orf109-201ENST00000358011 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
C1orf109-201ENST00000358011 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.28
C1orf109-201ENST00000358011 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.27
C1orf109-201ENST00000358011 BAZ1AQ9NRL2 1556 aaPredicted RBP22.85■■□□□ 1.25
C1orf109-201ENST00000358011 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
C1orf109-201ENST00000358011 WIZO95785 1651 aa22.83■■□□□ 1.25
C1orf109-201ENST00000358011 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
C1orf109-201ENST00000358011 ATAD2BQ9ULI0 1458 aa22.53■■□□□ 1.2
C1orf109-201ENST00000358011 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
C1orf109-201ENST00000358011 TOP2AP11388 1531 aaKnown RBP22.43■■□□□ 1.18
C1orf109-201ENST00000358011 CC2D2AQ9P2K1 1620 aa22.4■■□□□ 1.18
C1orf109-201ENST00000358011 SMARCA2P51531 1590 aa22.39■■□□□ 1.18
C1orf109-201ENST00000358011 PELP1Q8IZL8 1130 aaKnown RBP22.38■■□□□ 1.17
C1orf109-201ENST00000358011 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
C1orf109-201ENST00000358011 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
C1orf109-201ENST00000358011 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
C1orf109-201ENST00000358011 DNAJC5BQ9UF47 199 aa22.24■■□□□ 1.15
C1orf109-201ENST00000358011 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
C1orf109-201ENST00000358011 HRCP23327 699 aa22.18■■□□□ 1.14
C1orf109-201ENST00000358011 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
C1orf109-201ENST00000358011 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
C1orf109-201ENST00000358011 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
C1orf109-201ENST00000358011 NESP48681 1621 aa21.8■■□□□ 1.08
C1orf109-201ENST00000358011 CFTRP13569 1480 aa21.79■■□□□ 1.08
C1orf109-201ENST00000358011 CADPSQ9ULU8 1353 aa21.76■■□□□ 1.07
C1orf109-201ENST00000358011 MYT1Q01538 1121 aa21.76■■□□□ 1.07
C1orf109-201ENST00000358011 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
C1orf109-201ENST00000358011 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
C1orf109-201ENST00000358011 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
C1orf109-201ENST00000358011 FAM9AQ8IZU1 332 aaPredicted RBP21.59■■□□□ 1.05
C1orf109-201ENST00000358011 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
C1orf109-201ENST00000358011 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
C1orf109-201ENST00000358011 CUX1P39880 1505 aa21.49■■□□□ 1.03
C1orf109-201ENST00000358011 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
C1orf109-201ENST00000358011 PPARGC1BQ86YN6 1023 aaKnown RBP21.45■■□□□ 1.02
C1orf109-201ENST00000358011 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
C1orf109-201ENST00000358011 SOGA1O94964 1423 aa21.43■■□□□ 1.02
C1orf109-201ENST00000358011 TOP2BQ02880 1626 aa21.43■■□□□ 1.02
C1orf109-201ENST00000358011 RUSC2Q8N2Y8 1516 aa21.43■■□□□ 1.02
C1orf109-201ENST00000358011 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
C1orf109-201ENST00000358011 BIVM-ERCC5R4GMW8 1640 aa21.39■■□□□ 1.02
C1orf109-201ENST00000358011 PDS5BQ9NTI5 1447 aa21.39■■□□□ 1.01
C1orf109-201ENST00000358011 CEP164Q9UPV0 1460 aa21.37■■□□□ 1.01
C1orf109-201ENST00000358011 URB2Q14146 1524 aaKnown RBP21.33■■□□□ 1
C1orf109-201ENST00000358011 PCGF6Q9BYE7 350 aa21.32■■□□□ 1
C1orf109-201ENST00000358011 TOPBP1Q92547 1522 aa21.29■■□□□ 1
C1orf109-201ENST00000358011 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
C1orf109-201ENST00000358011 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
C1orf109-201ENST00000358011 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
C1orf109-201ENST00000358011 POLA1P09884 1462 aaPredicted RBP21.19■□□□□ 0.98
C1orf109-201ENST00000358011 ERCC6Q03468 1493 aa21.19■□□□□ 0.98
C1orf109-201ENST00000358011 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
C1orf109-201ENST00000358011 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
C1orf109-201ENST00000358011 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
C1orf109-201ENST00000358011 CUX2O14529 1486 aa21.11■□□□□ 0.97
C1orf109-201ENST00000358011 THOC2Q8NI27 1593 aaKnown RBP21.06■□□□□ 0.96
C1orf109-201ENST00000358011 EEA1Q15075 1411 aa21.05■□□□□ 0.96
C1orf109-201ENST00000358011 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
C1orf109-201ENST00000358011 WDR62O43379 1518 aa21.04■□□□□ 0.96
C1orf109-201ENST00000358011 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
C1orf109-201ENST00000358011 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
C1orf109-201ENST00000358011 TARBP1Q13395 1621 aaKnown RBP20.99■□□□□ 0.95
C1orf109-201ENST00000358011 IGF1RP08069 1367 aa20.98■□□□□ 0.95
C1orf109-201ENST00000358011 WDR97A6NE52 1622 aa20.97■□□□□ 0.95
C1orf109-201ENST00000358011 RAPGEF2Q9Y4G8 1499 aa20.95■□□□□ 0.94
C1orf109-201ENST00000358011 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
C1orf109-201ENST00000358011 ZNF608Q9ULD9 1512 aaPredicted RBP20.92■□□□□ 0.94
C1orf109-201ENST00000358011 AQRO60306 1485 aaKnown RBP eCLIP20.92■□□□□ 0.945e-6■■■□□ 16.9
C1orf109-201ENST00000358011 PRXQ9BXM0 1461 aa20.89■□□□□ 0.93
C1orf109-201ENST00000358011 KIF21BO75037 1637 aa20.88■□□□□ 0.93
C1orf109-201ENST00000358011 GOLGA3Q08378 1498 aa20.87■□□□□ 0.93
C1orf109-201ENST00000358011 ABCA5Q8WWZ7 1642 aa20.86■□□□□ 0.93
C1orf109-201ENST00000358011 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
C1orf109-201ENST00000358011 IFT140Q96RY7 1462 aa20.84■□□□□ 0.93
C1orf109-201ENST00000358011 CARMIL1Q5VZK9 1371 aa20.83■□□□□ 0.93
C1orf109-201ENST00000358011 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.93
C1orf109-201ENST00000358011 ZEB1P37275 1124 aaPredicted RBP20.8■□□□□ 0.92
C1orf109-201ENST00000358011 TNIKQ9UKE5 1360 aa20.79■□□□□ 0.92
C1orf109-201ENST00000358011 PBRM1Q86U86 1689 aa20.74■□□□□ 0.91
C1orf109-201ENST00000358011 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
C1orf109-201ENST00000358011 EIF4G3O43432 1585 aaKnown RBP20.73■□□□□ 0.91
C1orf109-201ENST00000358011 CEP162Q5TB80 1403 aa20.73■□□□□ 0.91
C1orf109-201ENST00000358011 GRIN2BQ13224 1484 aa20.67■□□□□ 0.9
C1orf109-201ENST00000358011 CUL7Q14999 1698 aa20.67■□□□□ 0.9
C1orf109-201ENST00000358011 TRIM26Q12899 539 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms