Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC10.06□□□□□ -0.8
USH2AO75445 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
USH2AO75445 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
USH2AO75445 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
USH2AO75445 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC10.06□□□□□ -0.8
USH2AO75445 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.06□□□□□ -0.8
USH2AO75445 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC10.06□□□□□ -0.8
USH2AO75445 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
USH2AO75445 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC10.06□□□□□ -0.8
USH2AO75445 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
USH2AO75445 SHF-206ENST00000560471 2499 ntTSL 5 BASIC10.06□□□□□ -0.8
USH2AO75445 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC10.06□□□□□ -0.8
USH2AO75445 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC10.06□□□□□ -0.8
USH2AO75445 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC10.06□□□□□ -0.8
USH2AO75445 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
USH2AO75445 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
USH2AO75445 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
USH2AO75445 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC10.06□□□□□ -0.8
USH2AO75445 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
USH2AO75445 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC10.05□□□□□ -0.8
USH2AO75445 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC10.05□□□□□ -0.8
USH2AO75445 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC10.05□□□□□ -0.8
USH2AO75445 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC10.05□□□□□ -0.8
USH2AO75445 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC10.05□□□□□ -0.8
USH2AO75445 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 USF2-207ENST00000595068 1612 ntTSL 5 BASIC10.05□□□□□ -0.8
USH2AO75445 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC10.05□□□□□ -0.8
USH2AO75445 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC10.05□□□□□ -0.8
USH2AO75445 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC10.05□□□□□ -0.8
USH2AO75445 AC083880.1-201ENST00000608266 535 ntBASIC10.05□□□□□ -0.8
USH2AO75445 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
USH2AO75445 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 UQCRFS1P1-201ENST00000435169 820 ntBASIC10.05□□□□□ -0.8
USH2AO75445 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
USH2AO75445 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC10.04□□□□□ -0.8
USH2AO75445 OR2I1P-207ENST00000453522 948 ntBASIC10.04□□□□□ -0.8
USH2AO75445 RNA5SP413-201ENST00000516373 109 ntBASIC10.04□□□□□ -0.8
USH2AO75445 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC10.04□□□□□ -0.8
USH2AO75445 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
USH2AO75445 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC10.04□□□□□ -0.8
USH2AO75445 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC10.04□□□□□ -0.8
USH2AO75445 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC10.04□□□□□ -0.8
USH2AO75445 AC073912.3-201ENST00000624414 853 ntBASIC10.04□□□□□ -0.8
USH2AO75445 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
USH2AO75445 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
USH2AO75445 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
USH2AO75445 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
USH2AO75445 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC10.04□□□□□ -0.8
USH2AO75445 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC10.04□□□□□ -0.8
USH2AO75445 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 KRT18P21-201ENST00000515767 1272 ntBASIC10.04□□□□□ -0.8
USH2AO75445 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
USH2AO75445 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
USH2AO75445 TESC-206ENST00000541210 936 ntTSL 3 BASIC10.04□□□□□ -0.8
USH2AO75445 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC10.04□□□□□ -0.8
USH2AO75445 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
USH2AO75445 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
USH2AO75445 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC10.03□□□□□ -0.8
USH2AO75445 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
USH2AO75445 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
USH2AO75445 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
USH2AO75445 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
USH2AO75445 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC10.03□□□□□ -0.8
USH2AO75445 APTR-203ENST00000430801 583 ntTSL 5 BASIC10.03□□□□□ -0.8
USH2AO75445 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC10.03□□□□□ -0.8
USH2AO75445 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
USH2AO75445 MME-217ENST00000616757 1315 ntTSL 5 BASIC10.03□□□□□ -0.8
USH2AO75445 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
USH2AO75445 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
USH2AO75445 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
USH2AO75445 BX005040.4-201ENST00000637145 1518 ntBASIC10.03□□□□□ -0.8
USH2AO75445 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
USH2AO75445 BAALC-201ENST00000297574 801 ntTSL 3 BASIC10.03□□□□□ -0.8
USH2AO75445 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
USH2AO75445 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms