Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
NPIPA3F8WFD2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 U3.5-201ENST00000363448 216 ntBASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AC022080.1-201ENST00000366255 781 ntBASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 GEMIN8P4-201ENST00000380526 729 ntBASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AC104961.1-201ENST00000427605 771 ntBASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 HLA-DPA2-205ENST00000433582 733 ntBASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AC087203.1-201ENST00000532111 1181 ntBASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AC068831.5-201ENST00000557387 328 ntBASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 HNRNPA1P5-201ENST00000558213 966 ntBASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AC005274.1-201ENST00000623460 802 ntBASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 AL445250.1-201ENST00000641671 2259 ntBASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
NPIPA3F8WFD2 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 NALT1-202ENST00000450304 437 ntTSL 3 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 CASP3-205ENST00000517513 964 ntTSL 5 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 AC092862.1-201ENST00000541534 533 ntBASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 AC078814.4-201ENST00000546650 327 ntBASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms