RNA–Protein interactions for RNA: ENST00000580113.1

KRT16P3-202, Transcript of keratin 16 pseudogene 3, humanhuman

TSL 3 BASIC

Gene KRT16P3, Length 1,012 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P3-202ENST00000580113 NISCHQ9Y2I1 1504 aa33.67■■■□□ 2.98
KRT16P3-202ENST00000580113 ABCC9O60706 1549 aa31.03■■■□□ 2.56
KRT16P3-202ENST00000580113 CCDC180Q9P1Z9 1646 aa30.45■■■□□ 2.47
KRT16P3-202ENST00000580113 DNAJC5BQ9UF47 199 aa29.54■■■□□ 2.32
KRT16P3-202ENST00000580113 RB1CC1Q8TDY2 1594 aa29.24■■■□□ 2.27
KRT16P3-202ENST00000580113 NACADO15069 1562 aa28.88■■■□□ 2.21
KRT16P3-202ENST00000580113 PABPN1Q86U42 306 aaKnown RBP eCLIP28.8■■■□□ 2.2
KRT16P3-202ENST00000580113 DCAF8L2P0C7V8 631 aa28.75■■■□□ 2.19
KRT16P3-202ENST00000580113 UNC13AQ9UPW8 1703 aa28.68■■■□□ 2.18
KRT16P3-202ENST00000580113 BICRAQ9NZM4 1560 aa28.43■■■□□ 2.14
KRT16P3-202ENST00000580113 MYO15BQ96JP2 1530 aa28.23■■■□□ 2.11
KRT16P3-202ENST00000580113 CC2D2AQ9P2K1 1620 aa27.98■■■□□ 2.07
KRT16P3-202ENST00000580113 CECR2Q9BXF3 1484 aa27.95■■■□□ 2.07
KRT16P3-202ENST00000580113 SHROOM4Q9ULL8 1493 aa27.87■■■□□ 2.05
KRT16P3-202ENST00000580113 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
KRT16P3-202ENST00000580113 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
KRT16P3-202ENST00000580113 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
KRT16P3-202ENST00000580113 DCAF1Q9Y4B6 1507 aa27.71■■■□□ 2.03
KRT16P3-202ENST00000580113 DNAJC5Q9H3Z4 198 aa27.45■■□□□ 1.98
KRT16P3-202ENST00000580113 CUX2O14529 1486 aa26.87■■□□□ 1.89
KRT16P3-202ENST00000580113 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
KRT16P3-202ENST00000580113 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
KRT16P3-202ENST00000580113 ATAD2BQ9ULI0 1458 aa26.53■■□□□ 1.84
KRT16P3-202ENST00000580113 NESP48681 1621 aa26.5■■□□□ 1.83
KRT16P3-202ENST00000580113 SMARCA2P51531 1590 aa26.42■■□□□ 1.82
KRT16P3-202ENST00000580113 HMGXB3Q12766 1538 aa26.42■■□□□ 1.82
KRT16P3-202ENST00000580113 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
KRT16P3-202ENST00000580113 THOC2Q8NI27 1593 aaKnown RBP26.32■■□□□ 1.8
KRT16P3-202ENST00000580113 BAZ1BQ9UIG0 1483 aaKnown RBP26.27■■□□□ 1.8
KRT16P3-202ENST00000580113 KIF21AQ7Z4S6 1674 aa26.18■■□□□ 1.78
KRT16P3-202ENST00000580113 BAZ1AQ9NRL2 1556 aaPredicted RBP26.17■■□□□ 1.78
KRT16P3-202ENST00000580113 LAMC3Q9Y6N6 1575 aa26.17■■□□□ 1.78
KRT16P3-202ENST00000580113 TRIM41Q8WV44 630 aa26.14■■□□□ 1.78
KRT16P3-202ENST00000580113 PEG3Q9GZU2 1588 aa26.09■■□□□ 1.77
KRT16P3-202ENST00000580113 PDS5BQ9NTI5 1447 aa26.01■■□□□ 1.75
KRT16P3-202ENST00000580113 MROH2BQ7Z745 1585 aa25.98■■□□□ 1.75
KRT16P3-202ENST00000580113 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
KRT16P3-202ENST00000580113 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
KRT16P3-202ENST00000580113 WDR62O43379 1518 aa25.8■■□□□ 1.72
KRT16P3-202ENST00000580113 WIZO95785 1651 aa25.69■■□□□ 1.7
KRT16P3-202ENST00000580113 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
KRT16P3-202ENST00000580113 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
KRT16P3-202ENST00000580113 OSCARQ8IYS5 282 aa25.57■■□□□ 1.68
KRT16P3-202ENST00000580113 CFTRP13569 1480 aa25.42■■□□□ 1.66
KRT16P3-202ENST00000580113 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
KRT16P3-202ENST00000580113 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
KRT16P3-202ENST00000580113 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
KRT16P3-202ENST00000580113 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
KRT16P3-202ENST00000580113 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
KRT16P3-202ENST00000580113 PRDM2Q13029 1718 aa25.23■■□□□ 1.63
KRT16P3-202ENST00000580113 ZNF608Q9ULD9 1512 aaPredicted RBP25.21■■□□□ 1.63
KRT16P3-202ENST00000580113 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.63
KRT16P3-202ENST00000580113 ARHGEF11O15085 1522 aa25.19■■□□□ 1.62
KRT16P3-202ENST00000580113 IFT140Q96RY7 1462 aa25.14■■□□□ 1.61
KRT16P3-202ENST00000580113 CYB5RLQ6IPT4 315 aa25.06■■□□□ 1.6
KRT16P3-202ENST00000580113 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
KRT16P3-202ENST00000580113 TOPBP1Q92547 1522 aa25.04■■□□□ 1.6
KRT16P3-202ENST00000580113 CHD1O14646 1710 aa25■■□□□ 1.59
KRT16P3-202ENST00000580113 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
KRT16P3-202ENST00000580113 TRHP20396 242 aaPredicted RBP24.98■■□□□ 1.59
KRT16P3-202ENST00000580113 ARAP1Q96P48 1450 aa24.91■■□□□ 1.58
KRT16P3-202ENST00000580113 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.58
KRT16P3-202ENST00000580113 DNMBPQ6XZF7 1577 aa24.9■■□□□ 1.58
KRT16P3-202ENST00000580113 ABCC8Q09428 1581 aa24.89■■□□□ 1.58
KRT16P3-202ENST00000580113 FBLN2P98095 1184 aa24.88■■□□□ 1.57
KRT16P3-202ENST00000580113 TARBP1Q13395 1621 aaKnown RBP24.87■■□□□ 1.57
KRT16P3-202ENST00000580113 POLA1P09884 1462 aaPredicted RBP24.75■■□□□ 1.55
KRT16P3-202ENST00000580113 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.55
KRT16P3-202ENST00000580113 TDRD9Q8NDG6 1382 aaKnown RBP24.67■■□□□ 1.54
KRT16P3-202ENST00000580113 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.53
KRT16P3-202ENST00000580113 SOGA1O94964 1423 aa24.62■■□□□ 1.53
KRT16P3-202ENST00000580113 CLASP1Q7Z460 1538 aa24.62■■□□□ 1.53
KRT16P3-202ENST00000580113 AEBP2Q6ZN18 517 aaPredicted RBP24.62■■□□□ 1.53
KRT16P3-202ENST00000580113 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
KRT16P3-202ENST00000580113 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
KRT16P3-202ENST00000580113 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
KRT16P3-202ENST00000580113 WDR97A6NE52 1622 aa24.5■■□□□ 1.51
KRT16P3-202ENST00000580113 MAGI1Q96QZ7 1491 aaPredicted RBP24.5■■□□□ 1.51
KRT16P3-202ENST00000580113 GRIN2BQ13224 1484 aa24.45■■□□□ 1.51
KRT16P3-202ENST00000580113 SYNJ2O15056 1496 aa24.44■■□□□ 1.5
KRT16P3-202ENST00000580113 CUX1P39880 1505 aa24.43■■□□□ 1.5
KRT16P3-202ENST00000580113 PBRM1Q86U86 1689 aa24.41■■□□□ 1.5
KRT16P3-202ENST00000580113 GAPVD1Q14C86 1478 aa24.4■■□□□ 1.5
KRT16P3-202ENST00000580113 ERCC6L2Q5T890 1561 aa24.27■■□□□ 1.48
KRT16P3-202ENST00000580113 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
KRT16P3-202ENST00000580113 ABCA10Q8WWZ4 1543 aa24.18■■□□□ 1.46
KRT16P3-202ENST00000580113 GRIN2AQ12879 1464 aa24.15■■□□□ 1.46
KRT16P3-202ENST00000580113 CEP170Q5SW79 1584 aa24.15■■□□□ 1.46
KRT16P3-202ENST00000580113 ADAMTS12P58397 1594 aa24.1■■□□□ 1.45
KRT16P3-202ENST00000580113 KIF13AQ9H1H9 1805 aa24.09■■□□□ 1.45
KRT16P3-202ENST00000580113 NUP160Q12769 1436 aa24.06■■□□□ 1.44
KRT16P3-202ENST00000580113 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
KRT16P3-202ENST00000580113 WRNQ14191 1432 aaPredicted RBP eCLIP23.99■■□□□ 1.43
KRT16P3-202ENST00000580113 FHAD1B1AJZ9 1412 aa23.96■■□□□ 1.43
KRT16P3-202ENST00000580113 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
KRT16P3-202ENST00000580113 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
KRT16P3-202ENST00000580113 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
KRT16P3-202ENST00000580113 ERICH3Q5RHP9 1530 aa23.87■■□□□ 1.41
KRT16P3-202ENST00000580113 FAM69CQ0P6D2 419 aa23.85■■□□□ 1.41
KRT16P3-202ENST00000580113 JPH4Q96JJ6 628 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms