Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.9□□□□□ -0.5
AP3S1Q92572 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
AP3S1Q92572 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 AC009533.1-201ENST00000539757 3158 ntBASIC11.9□□□□□ -0.5
AP3S1Q92572 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC11.9□□□□□ -0.51
AP3S1Q92572 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
AP3S1Q92572 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
AP3S1Q92572 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
AP3S1Q92572 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
AP3S1Q92572 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
AP3S1Q92572 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 LINC01561-201ENST00000369071 2176 ntBASIC11.89□□□□□ -0.51
AP3S1Q92572 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 FP325332.1-201ENST00000624818 2045 ntBASIC11.89□□□□□ -0.51
AP3S1Q92572 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC11.89□□□□□ -0.51
AP3S1Q92572 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.89□□□□□ -0.51
AP3S1Q92572 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
AP3S1Q92572 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
AP3S1Q92572 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
AP3S1Q92572 AL022342.1-201ENST00000400363 863 ntBASIC11.89□□□□□ -0.51
AP3S1Q92572 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
AP3S1Q92572 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC11.89□□□□□ -0.51
AP3S1Q92572 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.89□□□□□ -0.51
AP3S1Q92572 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.89□□□□□ -0.51
AP3S1Q92572 Z98259.2-201ENST00000641583 609 ntBASIC11.89□□□□□ -0.51
AP3S1Q92572 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
AP3S1Q92572 DDC-212ENST00000615193 1674 ntTSL 3 BASIC11.89□□□□□ -0.51
AP3S1Q92572 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
AP3S1Q92572 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC11.89□□□□□ -0.51
AP3S1Q92572 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.89□□□□□ -0.51
AP3S1Q92572 DDX11L2-201ENST00000437401 1398 ntBASIC11.89□□□□□ -0.51
AP3S1Q92572 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
AP3S1Q92572 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP3S1Q92572 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC11.89□□□□□ -0.51
AP3S1Q92572 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 AL109976.1-201ENST00000621919 5678 ntBASIC11.88□□□□□ -0.51
AP3S1Q92572 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
AP3S1Q92572 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.88□□□□□ -0.51
AP3S1Q92572 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP3S1Q92572 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.88□□□□□ -0.51
AP3S1Q92572 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms