RNA–Protein interactions for RNA: ENST00000528954.5

LPXN-203, Transcript of leupaxin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LPXN, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPXN-203ENST00000528954 NISCHQ9Y2I1 1504 aa24.91■■□□□ 1.58
LPXN-203ENST00000528954 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
LPXN-203ENST00000528954 ZCCHC6Q5VYS8 1495 aaKnown RBP21.17■□□□□ 0.98
LPXN-203ENST00000528954 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
LPXN-203ENST00000528954 CCDC180Q9P1Z9 1646 aa21.08■□□□□ 0.97
LPXN-203ENST00000528954 HRCP23327 699 aa20.92■□□□□ 0.94
LPXN-203ENST00000528954 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
LPXN-203ENST00000528954 MYO15BQ96JP2 1530 aa20.85■□□□□ 0.93
LPXN-203ENST00000528954 DCAF1Q9Y4B6 1507 aa20.54■□□□□ 0.88
LPXN-203ENST00000528954 ABCC9O60706 1549 aa20.5■□□□□ 0.87
LPXN-203ENST00000528954 PCGF6Q9BYE7 350 aa20.49■□□□□ 0.87
LPXN-203ENST00000528954 PPARGC1BQ86YN6 1023 aaKnown RBP20.26■□□□□ 0.83
LPXN-203ENST00000528954 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
LPXN-203ENST00000528954 LOC105371045A0A1W2PR82 267 aa20.15■□□□□ 0.82
LPXN-203ENST00000528954 TRIM26Q12899 539 aaPredicted RBP20.14■□□□□ 0.81
LPXN-203ENST00000528954 ZEB1P37275 1124 aaPredicted RBP19.95■□□□□ 0.78
LPXN-203ENST00000528954 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
LPXN-203ENST00000528954 NACADO15069 1562 aa19.78■□□□□ 0.76
LPXN-203ENST00000528954 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.76
LPXN-203ENST00000528954 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
LPXN-203ENST00000528954 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
LPXN-203ENST00000528954 SCRIBQ14160 1630 aa19.63■□□□□ 0.73
LPXN-203ENST00000528954 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
LPXN-203ENST00000528954 FAM9AQ8IZU1 332 aaPredicted RBP19.43■□□□□ 0.7
LPXN-203ENST00000528954 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
LPXN-203ENST00000528954 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
LPXN-203ENST00000528954 CECR2Q9BXF3 1484 aa19.33■□□□□ 0.69
LPXN-203ENST00000528954 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
LPXN-203ENST00000528954 WIZO95785 1651 aa19.24■□□□□ 0.67
LPXN-203ENST00000528954 BAZ1AQ9NRL2 1556 aaPredicted RBP19.23■□□□□ 0.67
LPXN-203ENST00000528954 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
LPXN-203ENST00000528954 ACIN1Q9UKV3 1341 aaKnown RBP19.2■□□□□ 0.66
LPXN-203ENST00000528954 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
LPXN-203ENST00000528954 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
LPXN-203ENST00000528954 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
LPXN-203ENST00000528954 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
LPXN-203ENST00000528954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.12■□□□□ 0.65
LPXN-203ENST00000528954 NEUROD1Q13562 356 aa19.07■□□□□ 0.64
LPXN-203ENST00000528954 DIEXFQ68CQ4 756 aaKnown RBP19.03■□□□□ 0.64
LPXN-203ENST00000528954 TOP2AP11388 1531 aaKnown RBP19.01■□□□□ 0.63
LPXN-203ENST00000528954 CENPBP07199 599 aaPredicted RBP19.01■□□□□ 0.63
LPXN-203ENST00000528954 TNIKQ9UKE5 1360 aa18.99■□□□□ 0.63
LPXN-203ENST00000528954 CEP162Q5TB80 1403 aa18.96■□□□□ 0.63
LPXN-203ENST00000528954 EEA1Q15075 1411 aa18.95■□□□□ 0.62
LPXN-203ENST00000528954 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
LPXN-203ENST00000528954 GTF3C3Q9Y5Q9 886 aa18.91■□□□□ 0.62
LPXN-203ENST00000528954 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
LPXN-203ENST00000528954 SMARCA2P51531 1590 aa18.9■□□□□ 0.62
LPXN-203ENST00000528954 MYT1Q01538 1121 aa18.88■□□□□ 0.61
LPXN-203ENST00000528954 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
LPXN-203ENST00000528954 ZNF316A6NFI3 1004 aaPredicted RBP18.84■□□□□ 0.61
LPXN-203ENST00000528954 SOGA1O94964 1423 aa18.83■□□□□ 0.61
LPXN-203ENST00000528954 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
LPXN-203ENST00000528954 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
LPXN-203ENST00000528954 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
LPXN-203ENST00000528954 RUSC2Q8N2Y8 1516 aa18.72■□□□□ 0.59
LPXN-203ENST00000528954 KIF21BO75037 1637 aa18.65■□□□□ 0.58
LPXN-203ENST00000528954 UBTFP17480 764 aaKnown RBP18.65■□□□□ 0.58
LPXN-203ENST00000528954 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
LPXN-203ENST00000528954 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
LPXN-203ENST00000528954 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
LPXN-203ENST00000528954 MIER1Q8N108 512 aa18.56■□□□□ 0.56
LPXN-203ENST00000528954 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
LPXN-203ENST00000528954 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
LPXN-203ENST00000528954 VPS8Q8N3P4 1428 aa18.54■□□□□ 0.56
LPXN-203ENST00000528954 CLIP1P30622 1438 aa18.53■□□□□ 0.56
LPXN-203ENST00000528954 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
LPXN-203ENST00000528954 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
LPXN-203ENST00000528954 YTHDC1Q96MU7 727 aaKnown RBP18.46■□□□□ 0.54
LPXN-203ENST00000528954 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
LPXN-203ENST00000528954 RAPGEF2Q9Y4G8 1499 aa18.37■□□□□ 0.53
LPXN-203ENST00000528954 APLP2Q06481 763 aa18.35■□□□□ 0.53
LPXN-203ENST00000528954 DHX57Q6P158 1386 aaKnown RBP18.32■□□□□ 0.52
LPXN-203ENST00000528954 ATAD2BQ9ULI0 1458 aa18.3■□□□□ 0.52
LPXN-203ENST00000528954 TOP2BQ02880 1626 aa18.28■□□□□ 0.52
LPXN-203ENST00000528954 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
LPXN-203ENST00000528954 NCAPD3P42695 1498 aa18.28■□□□□ 0.52
LPXN-203ENST00000528954 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
LPXN-203ENST00000528954 CUX2O14529 1486 aa18.23■□□□□ 0.51
LPXN-203ENST00000528954 ARAP1Q96P48 1450 aa18.23■□□□□ 0.51
LPXN-203ENST00000528954 PRXQ9BXM0 1461 aa18.23■□□□□ 0.51
LPXN-203ENST00000528954 RRBP1Q9P2E9 1410 aaKnown RBP18.21■□□□□ 0.51
LPXN-203ENST00000528954 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
LPXN-203ENST00000528954 SUPT16HQ9Y5B9 1047 aaKnown RBP18.17■□□□□ 0.5
LPXN-203ENST00000528954 KANK4Q5T7N3 995 aaPredicted RBP18.1■□□□□ 0.49
LPXN-203ENST00000528954 CCNB3Q8WWL7 1395 aa18.03■□□□□ 0.48
LPXN-203ENST00000528954 RANGAP1P46060 587 aaPredicted RBP18.02■□□□□ 0.48
LPXN-203ENST00000528954 TSHZ2Q9NRE2 1034 aa18.01■□□□□ 0.47
LPXN-203ENST00000528954 KIF27Q86VH2 1401 aa18■□□□□ 0.47
LPXN-203ENST00000528954 CUX1P39880 1505 aa17.99■□□□□ 0.47
LPXN-203ENST00000528954 MAP3K1Q13233 1512 aa17.99■□□□□ 0.47
LPXN-203ENST00000528954 ARHGAP35Q9NRY4 1499 aa17.99■□□□□ 0.47
LPXN-203ENST00000528954 MAPKBP1O60336 1514 aa17.96■□□□□ 0.47
LPXN-203ENST00000528954 RAB3GAP2Q9H2M9 1393 aa17.91■□□□□ 0.46
LPXN-203ENST00000528954 TIAM1Q13009 1591 aa17.88■□□□□ 0.45
LPXN-203ENST00000528954 ANP32EQ9BTT0 268 aa17.88■□□□□ 0.45
LPXN-203ENST00000528954 SETD5Q9C0A6 1442 aa17.87■□□□□ 0.45
LPXN-203ENST00000528954 TIMELESSQ9UNS1 1208 aa17.85■□□□□ 0.45
LPXN-203ENST00000528954 CFTRP13569 1480 aa17.85■□□□□ 0.45
LPXN-203ENST00000528954 KCNH8Q96L42 1107 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms