RNA–Protein interactions for RNA: ENST00000329798.5

FREM3-201, Transcript of FRAS1 related extracellular matrix 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FREM3, Length 6,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3-201ENST00000329798 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.28
FREM3-201ENST00000329798 NISCHQ9Y2I1 1504 aa21.05■□□□□ 0.96
FREM3-201ENST00000329798 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
FREM3-201ENST00000329798 SHROOM4Q9ULL8 1493 aa20.71■□□□□ 0.91
FREM3-201ENST00000329798 EHMT2Q96KQ7 1210 aa20.54■□□□□ 0.88
FREM3-201ENST00000329798 FAM9AQ8IZU1 332 aaPredicted RBP20.42■□□□□ 0.86
FREM3-201ENST00000329798 APLP2Q06481 763 aa20.02■□□□□ 0.79
FREM3-201ENST00000329798 RANGAP1P46060 587 aaPredicted RBP19.91■□□□□ 0.78
FREM3-201ENST00000329798 ATP1B4Q9UN42 357 aaPredicted RBP19.86■□□□□ 0.77
FREM3-201ENST00000329798 TTBK1Q5TCY1 1321 aaPredicted RBP19.65■□□□□ 0.74
FREM3-201ENST00000329798 MYT1LQ9UL68 1186 aa19.55■□□□□ 0.72
FREM3-201ENST00000329798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
FREM3-201ENST00000329798 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
FREM3-201ENST00000329798 ABCC9O60706 1549 aa19.32■□□□□ 0.68
FREM3-201ENST00000329798 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
FREM3-201ENST00000329798 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
FREM3-201ENST00000329798 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
FREM3-201ENST00000329798 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
FREM3-201ENST00000329798 FBLN2P98095 1184 aa18.94■□□□□ 0.62
FREM3-201ENST00000329798 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
FREM3-201ENST00000329798 ITGAEP38570 1179 aa18.7■□□□□ 0.58
FREM3-201ENST00000329798 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
FREM3-201ENST00000329798 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
FREM3-201ENST00000329798 PPARGC1BQ86YN6 1023 aaKnown RBP18.59■□□□□ 0.57
FREM3-201ENST00000329798 POLR3GLQ9BT43 218 aa18.59■□□□□ 0.57
FREM3-201ENST00000329798 CCER1Q8TC90 406 aaPredicted RBP18.57■□□□□ 0.56
FREM3-201ENST00000329798 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
FREM3-201ENST00000329798 BCANQ96GW7 911 aa18.46■□□□□ 0.55
FREM3-201ENST00000329798 CNGB1Q14028 1251 aaPredicted RBP18.35■□□□□ 0.53
FREM3-201ENST00000329798 ESF1Q9H501 851 aaKnown RBP18.35■□□□□ 0.53
FREM3-201ENST00000329798 NPM1P06748 294 aaKnown RBP eCLIP18.33■□□□□ 0.52
FREM3-201ENST00000329798 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
FREM3-201ENST00000329798 FAM50AQ14320 339 aaKnown RBP18.23■□□□□ 0.51
FREM3-201ENST00000329798 TRIM52Q96A61 297 aa18.2■□□□□ 0.5
FREM3-201ENST00000329798 P3H3Q8IVL6 736 aa18.12■□□□□ 0.49
FREM3-201ENST00000329798 ZNF777Q9ULD5 760 aaPredicted RBP18.07■□□□□ 0.48
FREM3-201ENST00000329798 SLC24A1O60721 1099 aa18.07■□□□□ 0.48
FREM3-201ENST00000329798 STAG3Q9UJ98 1225 aa18.05■□□□□ 0.48
FREM3-201ENST00000329798 SCRIBQ14160 1630 aa18.02■□□□□ 0.48
FREM3-201ENST00000329798 ZNF326Q5BKZ1 582 aaKnown RBP17.99■□□□□ 0.47
FREM3-201ENST00000329798 ZEB1P37275 1124 aaPredicted RBP17.98■□□□□ 0.47
FREM3-201ENST00000329798 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
FREM3-201ENST00000329798 NEFLP07196 543 aa17.96■□□□□ 0.47
FREM3-201ENST00000329798 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
FREM3-201ENST00000329798 LOC105371045A0A1W2PR82 267 aa17.93■□□□□ 0.46
FREM3-201ENST00000329798 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
FREM3-201ENST00000329798 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
FREM3-201ENST00000329798 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
FREM3-201ENST00000329798 CDK11AQ9UQ88 783 aaPredicted RBP17.88■□□□□ 0.45
FREM3-201ENST00000329798 CENPBP07199 599 aaPredicted RBP17.83■□□□□ 0.45
FREM3-201ENST00000329798 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
FREM3-201ENST00000329798 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
FREM3-201ENST00000329798 NEUROD1Q13562 356 aa17.8■□□□□ 0.44
FREM3-201ENST00000329798 ARID4BQ4LE39 1312 aaPredicted RBP17.79■□□□□ 0.44
FREM3-201ENST00000329798 A0A0G2JS52 829 aa17.72■□□□□ 0.43
FREM3-201ENST00000329798 RB1CC1Q8TDY2 1594 aa17.7■□□□□ 0.42
FREM3-201ENST00000329798 KCNH8Q96L42 1107 aa17.68■□□□□ 0.42
FREM3-201ENST00000329798 PLEKHG5O94827 1062 aa17.66■□□□□ 0.42
FREM3-201ENST00000329798 NEFMP07197 916 aa17.66■□□□□ 0.42
FREM3-201ENST00000329798 TRIM26Q12899 539 aaPredicted RBP17.66■□□□□ 0.42
FREM3-201ENST00000329798 C14orf37Q86TY3 774 aa17.65■□□□□ 0.42
FREM3-201ENST00000329798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.41
FREM3-201ENST00000329798 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
FREM3-201ENST00000329798 DAXXQ9UER7 740 aaPredicted RBP17.6■□□□□ 0.41
FREM3-201ENST00000329798 BCL11AQ9H165 835 aa17.6■□□□□ 0.41
FREM3-201ENST00000329798 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
FREM3-201ENST00000329798 ZBTB7CA1YPR0 619 aa17.53■□□□□ 0.4
FREM3-201ENST00000329798 HAP1P54257 671 aaPredicted RBP17.52■□□□□ 0.4
FREM3-201ENST00000329798 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
FREM3-201ENST00000329798 CSRNP3Q8WYN3 585 aa17.51■□□□□ 0.39
FREM3-201ENST00000329798 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
FREM3-201ENST00000329798 MYT1Q01538 1121 aa17.51■□□□□ 0.39
FREM3-201ENST00000329798 TSPY4P0CV99 314 aa17.42■□□□□ 0.38
FREM3-201ENST00000329798 TSPY10P0CW01 314 aa17.42■□□□□ 0.38
FREM3-201ENST00000329798 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
FREM3-201ENST00000329798 CHIC2Q9UKJ5 165 aa17.39■□□□□ 0.37
FREM3-201ENST00000329798 CCDC180Q9P1Z9 1646 aa17.38■□□□□ 0.37
FREM3-201ENST00000329798 CANXP27824 592 aaKnown RBP17.36■□□□□ 0.37
FREM3-201ENST00000329798 PLEKHD1A6NEE1 506 aa17.34■□□□□ 0.37
FREM3-201ENST00000329798 MLECQ14165 292 aa17.32■□□□□ 0.36
FREM3-201ENST00000329798 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
FREM3-201ENST00000329798 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
FREM3-201ENST00000329798 LMOD2Q6P5Q4 547 aa17.25■□□□□ 0.35
FREM3-201ENST00000329798 NACADO15069 1562 aa17.24■□□□□ 0.35
FREM3-201ENST00000329798 MTUS2Q5JR59 1369 aa17.22■□□□□ 0.35
FREM3-201ENST00000329798 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.35
FREM3-201ENST00000329798 ZCCHC6Q5VYS8 1495 aaKnown RBP17.21■□□□□ 0.34
FREM3-201ENST00000329798 ANP32CO43423 234 aa17.17■□□□□ 0.34
FREM3-201ENST00000329798 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
FREM3-201ENST00000329798 ARXQ96QS3 562 aa17.13■□□□□ 0.33
FREM3-201ENST00000329798 HRCP23327 699 aa17.08■□□□□ 0.32
FREM3-201ENST00000329798 NPHP1O15259 732 aa17.05■□□□□ 0.32
FREM3-201ENST00000329798 CFDP1Q9UEE9 299 aaPredicted RBP17.04■□□□□ 0.32
FREM3-201ENST00000329798 TONSLQ96HA7 1378 aa17.03■□□□□ 0.32
FREM3-201ENST00000329798 RRP7BPQ9NSQ0 103 aa17.02■□□□□ 0.32
FREM3-201ENST00000329798 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
FREM3-201ENST00000329798 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.31
FREM3-201ENST00000329798 TMC1Q8TDI8 760 aa17.01■□□□□ 0.31
FREM3-201ENST00000329798 RGL3Q3MIN7 710 aa17.01■□□□□ 0.31
FREM3-201ENST00000329798 CYB5RLQ6IPT4 315 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms