RNA–Protein interactions for RNA: ENST00000300747.9

TRIM68-201, Transcript of tripartite motif containing 68, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM68, Length 3,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM68-201ENST00000300747 NISCHQ9Y2I1 1504 aa24.63■■□□□ 1.53
TRIM68-201ENST00000300747 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
TRIM68-201ENST00000300747 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
TRIM68-201ENST00000300747 DCAF8L2P0C7V8 631 aa21.84■■□□□ 1.09
TRIM68-201ENST00000300747 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
TRIM68-201ENST00000300747 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
TRIM68-201ENST00000300747 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
TRIM68-201ENST00000300747 PPARGC1BQ86YN6 1023 aaKnown RBP20.88■□□□□ 0.93
TRIM68-201ENST00000300747 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
TRIM68-201ENST00000300747 HRCP23327 699 aa20.83■□□□□ 0.93
TRIM68-201ENST00000300747 EHMT2Q96KQ7 1210 aa20.83■□□□□ 0.93
TRIM68-201ENST00000300747 ZCCHC6Q5VYS8 1495 aaKnown RBP20.76■□□□□ 0.91
TRIM68-201ENST00000300747 FAM9AQ8IZU1 332 aaPredicted RBP20.6■□□□□ 0.89
TRIM68-201ENST00000300747 CCDC180Q9P1Z9 1646 aa20.3■□□□□ 0.84
TRIM68-201ENST00000300747 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
TRIM68-201ENST00000300747 TRIM26Q12899 539 aaPredicted RBP20.2■□□□□ 0.82
TRIM68-201ENST00000300747 TTBK1Q5TCY1 1321 aaPredicted RBP20.14■□□□□ 0.81
TRIM68-201ENST00000300747 DCAF1Q9Y4B6 1507 aa19.99■□□□□ 0.79
TRIM68-201ENST00000300747 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
TRIM68-201ENST00000300747 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
TRIM68-201ENST00000300747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
TRIM68-201ENST00000300747 ABCC9O60706 1549 aa19.72■□□□□ 0.75
TRIM68-201ENST00000300747 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
TRIM68-201ENST00000300747 CCER1Q8TC90 406 aaPredicted RBP19.7■□□□□ 0.74
TRIM68-201ENST00000300747 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
TRIM68-201ENST00000300747 CECR2Q9BXF3 1484 aa19.57■□□□□ 0.72
TRIM68-201ENST00000300747 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
TRIM68-201ENST00000300747 RANGAP1P46060 587 aaPredicted RBP19.53■□□□□ 0.72
TRIM68-201ENST00000300747 UBTFP17480 764 aaKnown RBP19.45■□□□□ 0.7
TRIM68-201ENST00000300747 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
TRIM68-201ENST00000300747 YTHDC1Q96MU7 727 aaKnown RBP19.36■□□□□ 0.69
TRIM68-201ENST00000300747 DIEXFQ68CQ4 756 aaKnown RBP19.3■□□□□ 0.68
TRIM68-201ENST00000300747 NEUROD1Q13562 356 aa19.28■□□□□ 0.68
TRIM68-201ENST00000300747 HNRNPUL2Q1KMD3 747 aaKnown RBP19.28■□□□□ 0.68
TRIM68-201ENST00000300747 PABPN1Q86U42 306 aaKnown RBP eCLIP19.27■□□□□ 0.68
TRIM68-201ENST00000300747 WIZO95785 1651 aa19.25■□□□□ 0.67
TRIM68-201ENST00000300747 GTF3C3Q9Y5Q9 886 aa19.2■□□□□ 0.66
TRIM68-201ENST00000300747 ACIN1Q9UKV3 1341 aaKnown RBP19.16■□□□□ 0.66
TRIM68-201ENST00000300747 ABCC8Q09428 1581 aa19.15■□□□□ 0.66
TRIM68-201ENST00000300747 CENPBP07199 599 aaPredicted RBP19.11■□□□□ 0.65
TRIM68-201ENST00000300747 PELP1Q8IZL8 1130 aaKnown RBP19.1■□□□□ 0.65
TRIM68-201ENST00000300747 SOGA1O94964 1423 aa19.09■□□□□ 0.65
TRIM68-201ENST00000300747 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
TRIM68-201ENST00000300747 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
TRIM68-201ENST00000300747 CEP162Q5TB80 1403 aa19.03■□□□□ 0.64
TRIM68-201ENST00000300747 APLP2Q06481 763 aa19.02■□□□□ 0.64
TRIM68-201ENST00000300747 RUSC2Q8N2Y8 1516 aa18.99■□□□□ 0.63
TRIM68-201ENST00000300747 NACADO15069 1562 aa18.98■□□□□ 0.63
TRIM68-201ENST00000300747 ZNF316A6NFI3 1004 aaPredicted RBP18.93■□□□□ 0.62
TRIM68-201ENST00000300747 MIER1Q8N108 512 aa18.87■□□□□ 0.61
TRIM68-201ENST00000300747 ITGAEP38570 1179 aa18.87■□□□□ 0.61
TRIM68-201ENST00000300747 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
TRIM68-201ENST00000300747 TNIKQ9UKE5 1360 aa18.79■□□□□ 0.6
TRIM68-201ENST00000300747 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
TRIM68-201ENST00000300747 WRNQ14191 1432 aaPredicted RBP eCLIP18.69■□□□□ 0.58
TRIM68-201ENST00000300747 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
TRIM68-201ENST00000300747 CLIP1P30622 1438 aa18.67■□□□□ 0.58
TRIM68-201ENST00000300747 GOLGA3Q08378 1498 aa18.66■□□□□ 0.58
TRIM68-201ENST00000300747 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
TRIM68-201ENST00000300747 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.57
TRIM68-201ENST00000300747 EIF4G1Q04637 1599 aaKnown RBP18.58■□□□□ 0.56
TRIM68-201ENST00000300747 KANK4Q5T7N3 995 aaPredicted RBP18.53■□□□□ 0.56
TRIM68-201ENST00000300747 EEA1Q15075 1411 aa18.52■□□□□ 0.56
TRIM68-201ENST00000300747 RAPGEF2Q9Y4G8 1499 aa18.51■□□□□ 0.55
TRIM68-201ENST00000300747 CEP164Q9UPV0 1460 aa18.48■□□□□ 0.55
TRIM68-201ENST00000300747 P3H3Q8IVL6 736 aa18.45■□□□□ 0.54
TRIM68-201ENST00000300747 BCANQ96GW7 911 aa18.45■□□□□ 0.54
TRIM68-201ENST00000300747 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
TRIM68-201ENST00000300747 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
TRIM68-201ENST00000300747 HIRIP3Q9BW71 556 aaPredicted RBP18.41■□□□□ 0.54
TRIM68-201ENST00000300747 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
TRIM68-201ENST00000300747 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
TRIM68-201ENST00000300747 KCNH8Q96L42 1107 aa18.36■□□□□ 0.53
TRIM68-201ENST00000300747 UNC13AQ9UPW8 1703 aa18.31■□□□□ 0.52
TRIM68-201ENST00000300747 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
TRIM68-201ENST00000300747 DDX10Q13206 875 aaKnown RBP18.27■□□□□ 0.52
TRIM68-201ENST00000300747 DHX57Q6P158 1386 aaKnown RBP18.26■□□□□ 0.51
TRIM68-201ENST00000300747 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
TRIM68-201ENST00000300747 KIF21BO75037 1637 aa18.25■□□□□ 0.51
TRIM68-201ENST00000300747 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
TRIM68-201ENST00000300747 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
TRIM68-201ENST00000300747 TRIM52Q96A61 297 aa18.16■□□□□ 0.5
TRIM68-201ENST00000300747 ARAP1Q96P48 1450 aa18.13■□□□□ 0.49
TRIM68-201ENST00000300747 MYT1Q01538 1121 aa18.13■□□□□ 0.49
TRIM68-201ENST00000300747 CCNB3Q8WWL7 1395 aa18.12■□□□□ 0.49
TRIM68-201ENST00000300747 FKBP8Q14318 412 aa18.11■□□□□ 0.49
TRIM68-201ENST00000300747 CNGB1Q14028 1251 aaPredicted RBP18.09■□□□□ 0.49
TRIM68-201ENST00000300747 KIF27Q86VH2 1401 aa18.07■□□□□ 0.48
TRIM68-201ENST00000300747 RAB3GAP2Q9H2M9 1393 aa18.07■□□□□ 0.48
TRIM68-201ENST00000300747 ARID3CA6NKF2 412 aa18.06■□□□□ 0.48
TRIM68-201ENST00000300747 CLSPNQ9HAW4 1339 aa18■□□□□ 0.47
TRIM68-201ENST00000300747 NEFLP07196 543 aa18■□□□□ 0.47
TRIM68-201ENST00000300747 CUX2O14529 1486 aa18■□□□□ 0.47
TRIM68-201ENST00000300747 TSHZ2Q9NRE2 1034 aa17.99■□□□□ 0.47
TRIM68-201ENST00000300747 IRX6P78412 446 aaPredicted RBP17.98■□□□□ 0.47
TRIM68-201ENST00000300747 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
TRIM68-201ENST00000300747 TOP2BQ02880 1626 aa17.96■□□□□ 0.47
TRIM68-201ENST00000300747 ARHGAP35Q9NRY4 1499 aa17.94■□□□□ 0.46
TRIM68-201ENST00000300747 CUX1P39880 1505 aa17.94■□□□□ 0.46
TRIM68-201ENST00000300747 ANP32CO43423 234 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms