RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
PCDHGA4-202ENST00000612927 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
PCDHGA4-202ENST00000612927 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
PCDHGA4-202ENST00000612927 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
PCDHGA4-202ENST00000612927 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.17
PCDHGA4-202ENST00000612927 DCAF1Q9Y4B6 1507 aa22.32■■□□□ 1.16
PCDHGA4-202ENST00000612927 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
PCDHGA4-202ENST00000612927 ABCC9O60706 1549 aa21.86■■□□□ 1.09
PCDHGA4-202ENST00000612927 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
PCDHGA4-202ENST00000612927 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
PCDHGA4-202ENST00000612927 NACADO15069 1562 aa21.65■■□□□ 1.06
PCDHGA4-202ENST00000612927 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
PCDHGA4-202ENST00000612927 RSF1Q96T23 1441 aaPredicted RBP21.24■□□□□ 0.99
PCDHGA4-202ENST00000612927 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
PCDHGA4-202ENST00000612927 CECR2Q9BXF3 1484 aa21.12■□□□□ 0.97
PCDHGA4-202ENST00000612927 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
PCDHGA4-202ENST00000612927 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
PCDHGA4-202ENST00000612927 WIZO95785 1651 aa20.88■□□□□ 0.93
PCDHGA4-202ENST00000612927 BAZ1AQ9NRL2 1556 aaPredicted RBP20.86■□□□□ 0.93
PCDHGA4-202ENST00000612927 HRCP23327 699 aa20.86■□□□□ 0.93
PCDHGA4-202ENST00000612927 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
PCDHGA4-202ENST00000612927 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
PCDHGA4-202ENST00000612927 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
PCDHGA4-202ENST00000612927 TOP2AP11388 1531 aaKnown RBP20.6■□□□□ 0.89
PCDHGA4-202ENST00000612927 LOC105371045A0A1W2PR82 267 aa20.59■□□□□ 0.89
PCDHGA4-202ENST00000612927 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
PCDHGA4-202ENST00000612927 EIF4G1Q04637 1599 aaKnown RBP20.48■□□□□ 0.87
PCDHGA4-202ENST00000612927 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
PCDHGA4-202ENST00000612927 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
PCDHGA4-202ENST00000612927 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
PCDHGA4-202ENST00000612927 PCGF6Q9BYE7 350 aa20.36■□□□□ 0.85
PCDHGA4-202ENST00000612927 ATAD2BQ9ULI0 1458 aa20.31■□□□□ 0.84
PCDHGA4-202ENST00000612927 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
PCDHGA4-202ENST00000612927 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
PCDHGA4-202ENST00000612927 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
PCDHGA4-202ENST00000612927 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
PCDHGA4-202ENST00000612927 PPARGC1BQ86YN6 1023 aaKnown RBP20.18■□□□□ 0.82
PCDHGA4-202ENST00000612927 EHMT2Q96KQ7 1210 aa20.15■□□□□ 0.82
PCDHGA4-202ENST00000612927 NCAPD3P42695 1498 aa20.01■□□□□ 0.79
PCDHGA4-202ENST00000612927 HMGXB3Q12766 1538 aa20■□□□□ 0.79
PCDHGA4-202ENST00000612927 TRIM26Q12899 539 aaPredicted RBP19.98■□□□□ 0.79
PCDHGA4-202ENST00000612927 WRNQ14191 1432 aaPredicted RBP eCLIP19.96■□□□□ 0.79
PCDHGA4-202ENST00000612927 SOGA1O94964 1423 aa19.94■□□□□ 0.78
PCDHGA4-202ENST00000612927 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
PCDHGA4-202ENST00000612927 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
PCDHGA4-202ENST00000612927 EEA1Q15075 1411 aa19.83■□□□□ 0.76
PCDHGA4-202ENST00000612927 ZEB1P37275 1124 aaPredicted RBP19.77■□□□□ 0.75
PCDHGA4-202ENST00000612927 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.75
PCDHGA4-202ENST00000612927 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
PCDHGA4-202ENST00000612927 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
PCDHGA4-202ENST00000612927 CFTRP13569 1480 aa19.71■□□□□ 0.75
PCDHGA4-202ENST00000612927 MYT1Q01538 1121 aa19.71■□□□□ 0.75
PCDHGA4-202ENST00000612927 BIVM-ERCC5R4GMW8 1640 aa19.68■□□□□ 0.74
PCDHGA4-202ENST00000612927 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
PCDHGA4-202ENST00000612927 GOLGA3Q08378 1498 aa19.65■□□□□ 0.74
PCDHGA4-202ENST00000612927 CEP162Q5TB80 1403 aa19.64■□□□□ 0.74
PCDHGA4-202ENST00000612927 CUX1P39880 1505 aa19.62■□□□□ 0.73
PCDHGA4-202ENST00000612927 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
PCDHGA4-202ENST00000612927 KIF21BO75037 1637 aa19.6■□□□□ 0.73
PCDHGA4-202ENST00000612927 UBTFP17480 764 aaKnown RBP19.59■□□□□ 0.73
PCDHGA4-202ENST00000612927 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
PCDHGA4-202ENST00000612927 PRDM2Q13029 1718 aa19.58■□□□□ 0.73
PCDHGA4-202ENST00000612927 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
PCDHGA4-202ENST00000612927 RAPGEF2Q9Y4G8 1499 aa19.49■□□□□ 0.71
PCDHGA4-202ENST00000612927 TTBK1Q5TCY1 1321 aaPredicted RBP19.46■□□□□ 0.71
PCDHGA4-202ENST00000612927 PRXQ9BXM0 1461 aa19.39■□□□□ 0.7
PCDHGA4-202ENST00000612927 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
PCDHGA4-202ENST00000612927 CLIP1P30622 1438 aa19.38■□□□□ 0.69
PCDHGA4-202ENST00000612927 FANCD2Q9BXW9 1451 aa19.37■□□□□ 0.69
PCDHGA4-202ENST00000612927 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
PCDHGA4-202ENST00000612927 NESP48681 1621 aa19.35■□□□□ 0.69
PCDHGA4-202ENST00000612927 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.68
PCDHGA4-202ENST00000612927 CUX2O14529 1486 aa19.29■□□□□ 0.68
PCDHGA4-202ENST00000612927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.28■□□□□ 0.68
PCDHGA4-202ENST00000612927 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
PCDHGA4-202ENST00000612927 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
PCDHGA4-202ENST00000612927 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
PCDHGA4-202ENST00000612927 DNMBPQ6XZF7 1577 aa19.24■□□□□ 0.67
PCDHGA4-202ENST00000612927 LAMC3Q9Y6N6 1575 aa19.24■□□□□ 0.67
PCDHGA4-202ENST00000612927 ACIN1Q9UKV3 1341 aaKnown RBP19.23■□□□□ 0.67
PCDHGA4-202ENST00000612927 IGF1RP08069 1367 aa19.21■□□□□ 0.67
PCDHGA4-202ENST00000612927 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
PCDHGA4-202ENST00000612927 CCER1Q8TC90 406 aaPredicted RBP19.18■□□□□ 0.66
PCDHGA4-202ENST00000612927 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
PCDHGA4-202ENST00000612927 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
PCDHGA4-202ENST00000612927 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
PCDHGA4-202ENST00000612927 URB2Q14146 1524 aaKnown RBP19.13■□□□□ 0.65
PCDHGA4-202ENST00000612927 ABCA10Q8WWZ4 1543 aa19.12■□□□□ 0.65
PCDHGA4-202ENST00000612927 CARMIL1Q5VZK9 1371 aa19.12■□□□□ 0.65
PCDHGA4-202ENST00000612927 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
PCDHGA4-202ENST00000612927 NEUROD1Q13562 356 aa19.08■□□□□ 0.65
PCDHGA4-202ENST00000612927 ARHGAP35Q9NRY4 1499 aa19.06■□□□□ 0.64
PCDHGA4-202ENST00000612927 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
PCDHGA4-202ENST00000612927 CENPBP07199 599 aaPredicted RBP19.05■□□□□ 0.64
PCDHGA4-202ENST00000612927 APLP2Q06481 763 aa19.05■□□□□ 0.64
PCDHGA4-202ENST00000612927 WDR97A6NE52 1622 aa19.02■□□□□ 0.64
PCDHGA4-202ENST00000612927 GTF3C3Q9Y5Q9 886 aa18.98■□□□□ 0.63
PCDHGA4-202ENST00000612927 HNRNPUL2Q1KMD3 747 aaKnown RBP18.96■□□□□ 0.63
PCDHGA4-202ENST00000612927 CUL7Q14999 1698 aa18.95■□□□□ 0.62
PCDHGA4-202ENST00000612927 ABCA5Q8WWZ7 1642 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms