RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 NISCHQ9Y2I1 1504 aa22.34■■□□□ 1.17
CYFIP1-207ENST00000617556 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
CYFIP1-207ENST00000617556 SUPT5HO00267 1087 aaKnown RBP20.63■□□□□ 0.89
CYFIP1-207ENST00000617556 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
CYFIP1-207ENST00000617556 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
CYFIP1-207ENST00000617556 APLP2Q06481 763 aa19.35■□□□□ 0.69
CYFIP1-207ENST00000617556 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
CYFIP1-207ENST00000617556 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
CYFIP1-207ENST00000617556 ABCC9O60706 1549 aa19.02■□□□□ 0.63
CYFIP1-207ENST00000617556 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
CYFIP1-207ENST00000617556 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
CYFIP1-207ENST00000617556 PCGF6Q9BYE7 350 aa18.88■□□□□ 0.61
CYFIP1-207ENST00000617556 TTBK1Q5TCY1 1321 aaPredicted RBP18.88■□□□□ 0.61
CYFIP1-207ENST00000617556 ATP1B4Q9UN42 357 aaPredicted RBP18.72■□□□□ 0.59
CYFIP1-207ENST00000617556 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
CYFIP1-207ENST00000617556 CHIC1Q5VXU3 224 aa18.65■□□□□ 0.58
CYFIP1-207ENST00000617556 ZEB1P37275 1124 aaPredicted RBP18.64■□□□□ 0.58
CYFIP1-207ENST00000617556 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
CYFIP1-207ENST00000617556 ZCCHC6Q5VYS8 1495 aaKnown RBP18.56■□□□□ 0.56
CYFIP1-207ENST00000617556 CCER1Q8TC90 406 aaPredicted RBP18.56■□□□□ 0.56
CYFIP1-207ENST00000617556 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
CYFIP1-207ENST00000617556 TRIM26Q12899 539 aaPredicted RBP18.39■□□□□ 0.53
CYFIP1-207ENST00000617556 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
CYFIP1-207ENST00000617556 PPARGC1BQ86YN6 1023 aaKnown RBP18.35■□□□□ 0.53
CYFIP1-207ENST00000617556 SCRIBQ14160 1630 aa18.33■□□□□ 0.52
CYFIP1-207ENST00000617556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.18■□□□□ 0.5
CYFIP1-207ENST00000617556 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
CYFIP1-207ENST00000617556 CENPBP07199 599 aaPredicted RBP18.14■□□□□ 0.5
CYFIP1-207ENST00000617556 RB1CC1Q8TDY2 1594 aa18.1■□□□□ 0.49
CYFIP1-207ENST00000617556 ITGAEP38570 1179 aa18.08■□□□□ 0.48
CYFIP1-207ENST00000617556 NACADO15069 1562 aa18■□□□□ 0.47
CYFIP1-207ENST00000617556 HRCP23327 699 aa17.98■□□□□ 0.47
CYFIP1-207ENST00000617556 MYT1LQ9UL68 1186 aa17.96■□□□□ 0.46
CYFIP1-207ENST00000617556 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
CYFIP1-207ENST00000617556 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
CYFIP1-207ENST00000617556 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
CYFIP1-207ENST00000617556 YTHDC1Q96MU7 727 aaKnown RBP17.76■□□□□ 0.43
CYFIP1-207ENST00000617556 FBLN2P98095 1184 aa17.76■□□□□ 0.43
CYFIP1-207ENST00000617556 NEFLP07196 543 aa17.74■□□□□ 0.43
CYFIP1-207ENST00000617556 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
CYFIP1-207ENST00000617556 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
CYFIP1-207ENST00000617556 TRIM52Q96A61 297 aa17.62■□□□□ 0.41
CYFIP1-207ENST00000617556 P3H3Q8IVL6 736 aa17.61■□□□□ 0.41
CYFIP1-207ENST00000617556 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
CYFIP1-207ENST00000617556 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
CYFIP1-207ENST00000617556 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
CYFIP1-207ENST00000617556 CDK11AQ9UQ88 783 aaPredicted RBP17.5■□□□□ 0.39
CYFIP1-207ENST00000617556 NEUROD1Q13562 356 aa17.47■□□□□ 0.39
CYFIP1-207ENST00000617556 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
CYFIP1-207ENST00000617556 EEA1Q15075 1411 aa17.44■□□□□ 0.38
CYFIP1-207ENST00000617556 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
CYFIP1-207ENST00000617556 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
CYFIP1-207ENST00000617556 CECR2Q9BXF3 1484 aa17.41■□□□□ 0.38
CYFIP1-207ENST00000617556 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
CYFIP1-207ENST00000617556 CNGB1Q14028 1251 aaPredicted RBP17.35■□□□□ 0.37
CYFIP1-207ENST00000617556 ZNF777Q9ULD5 760 aaPredicted RBP17.33■□□□□ 0.36
CYFIP1-207ENST00000617556 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
CYFIP1-207ENST00000617556 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
CYFIP1-207ENST00000617556 CLIP1P30622 1438 aa17.31■□□□□ 0.36
CYFIP1-207ENST00000617556 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
CYFIP1-207ENST00000617556 CHMP7Q8WUX9 453 aaPredicted RBP17.27■□□□□ 0.36
CYFIP1-207ENST00000617556 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
CYFIP1-207ENST00000617556 MROH2BQ7Z745 1585 aa17.24■□□□□ 0.35
CYFIP1-207ENST00000617556 ZNF316A6NFI3 1004 aaPredicted RBP17.24■□□□□ 0.35
CYFIP1-207ENST00000617556 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
CYFIP1-207ENST00000617556 NPM1P06748 294 aaKnown RBP eCLIP17.2■□□□□ 0.34
CYFIP1-207ENST00000617556 ANP32CO43423 234 aa17.2■□□□□ 0.34
CYFIP1-207ENST00000617556 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
CYFIP1-207ENST00000617556 CEP162Q5TB80 1403 aa17.19■□□□□ 0.34
CYFIP1-207ENST00000617556 MTUS2Q5JR59 1369 aa17.18■□□□□ 0.34
CYFIP1-207ENST00000617556 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
CYFIP1-207ENST00000617556 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
CYFIP1-207ENST00000617556 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
CYFIP1-207ENST00000617556 TONSLQ96HA7 1378 aa17.1■□□□□ 0.33
CYFIP1-207ENST00000617556 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
CYFIP1-207ENST00000617556 CHIC2Q9UKJ5 165 aa17.04■□□□□ 0.32
CYFIP1-207ENST00000617556 TSPY4P0CV99 314 aa17.04■□□□□ 0.32
CYFIP1-207ENST00000617556 TSPY10P0CW01 314 aa17.04■□□□□ 0.32
CYFIP1-207ENST00000617556 DAXXQ9UER7 740 aaPredicted RBP17.02■□□□□ 0.31
CYFIP1-207ENST00000617556 WIZO95785 1651 aa17.02■□□□□ 0.31
CYFIP1-207ENST00000617556 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
CYFIP1-207ENST00000617556 CUX2O14529 1486 aa16.99■□□□□ 0.31
CYFIP1-207ENST00000617556 BCANQ96GW7 911 aa16.98■□□□□ 0.31
CYFIP1-207ENST00000617556 PLEKHD1A6NEE1 506 aa16.97■□□□□ 0.31
CYFIP1-207ENST00000617556 SOGA1O94964 1423 aa16.96■□□□□ 0.31
CYFIP1-207ENST00000617556 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
CYFIP1-207ENST00000617556 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
CYFIP1-207ENST00000617556 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
CYFIP1-207ENST00000617556 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
CYFIP1-207ENST00000617556 ACIN1Q9UKV3 1341 aaKnown RBP16.93■□□□□ 0.3
CYFIP1-207ENST00000617556 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
CYFIP1-207ENST00000617556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.3
CYFIP1-207ENST00000617556 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
CYFIP1-207ENST00000617556 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
CYFIP1-207ENST00000617556 STAG3Q9UJ98 1225 aa16.89■□□□□ 0.29
CYFIP1-207ENST00000617556 KCNH8Q96L42 1107 aa16.85■□□□□ 0.29
CYFIP1-207ENST00000617556 RRP7BPQ9NSQ0 103 aa16.85■□□□□ 0.29
CYFIP1-207ENST00000617556 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
CYFIP1-207ENST00000617556 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
CYFIP1-207ENST00000617556 NEFMP07197 916 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms