RNA–Protein interactions for RNA: ENST00000218340.3

RP2-201, Transcript of RP2, ARL3 GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RP2, Length 3,803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP2-201ENST00000218340 NISCHQ9Y2I1 1504 aa25.06■■□□□ 1.6
RP2-201ENST00000218340 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.17
RP2-201ENST00000218340 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.17
RP2-201ENST00000218340 SUPT5HO00267 1087 aaKnown RBP22.05■■□□□ 1.12
RP2-201ENST00000218340 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
RP2-201ENST00000218340 CCDC180Q9P1Z9 1646 aa20.95■□□□□ 0.94
RP2-201ENST00000218340 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
RP2-201ENST00000218340 EHMT2Q96KQ7 1210 aa20.67■□□□□ 0.9
RP2-201ENST00000218340 PCGF6Q9BYE7 350 aa20.56■□□□□ 0.88
RP2-201ENST00000218340 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
RP2-201ENST00000218340 ABCC9O60706 1549 aa20.46■□□□□ 0.87
RP2-201ENST00000218340 LOC105371045A0A1W2PR82 267 aa20.45■□□□□ 0.86
RP2-201ENST00000218340 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
RP2-201ENST00000218340 SCRIBQ14160 1630 aa20.26■□□□□ 0.83
RP2-201ENST00000218340 MYO15BQ96JP2 1530 aa20.26■□□□□ 0.83
RP2-201ENST00000218340 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
RP2-201ENST00000218340 HRCP23327 699 aa20.07■□□□□ 0.8
RP2-201ENST00000218340 RSF1Q96T23 1441 aaPredicted RBP19.94■□□□□ 0.78
RP2-201ENST00000218340 TTBK1Q5TCY1 1321 aaPredicted RBP19.94■□□□□ 0.78
RP2-201ENST00000218340 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
RP2-201ENST00000218340 TRIM26Q12899 539 aaPredicted RBP19.9■□□□□ 0.78
RP2-201ENST00000218340 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
RP2-201ENST00000218340 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
RP2-201ENST00000218340 NACADO15069 1562 aa19.71■□□□□ 0.75
RP2-201ENST00000218340 UBTFP17480 764 aaKnown RBP19.67■□□□□ 0.74
RP2-201ENST00000218340 RANGAP1P46060 587 aaPredicted RBP19.64■□□□□ 0.73
RP2-201ENST00000218340 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
RP2-201ENST00000218340 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
RP2-201ENST00000218340 ZEB1P37275 1124 aaPredicted RBP19.53■□□□□ 0.72
RP2-201ENST00000218340 CCER1Q8TC90 406 aaPredicted RBP19.51■□□□□ 0.71
RP2-201ENST00000218340 APLP2Q06481 763 aa19.42■□□□□ 0.7
RP2-201ENST00000218340 WIZO95785 1651 aa19.38■□□□□ 0.69
RP2-201ENST00000218340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.37■□□□□ 0.69
RP2-201ENST00000218340 BAZ1AQ9NRL2 1556 aaPredicted RBP19.33■□□□□ 0.69
RP2-201ENST00000218340 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
RP2-201ENST00000218340 HNRNPUL2Q1KMD3 747 aaKnown RBP19.16■□□□□ 0.66
RP2-201ENST00000218340 ABCC8Q09428 1581 aa19.15■□□□□ 0.66
RP2-201ENST00000218340 CCDC88BA6NC98 1476 aa19.14■□□□□ 0.66
RP2-201ENST00000218340 SOGA1O94964 1423 aa19.06■□□□□ 0.64
RP2-201ENST00000218340 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
RP2-201ENST00000218340 SMARCA4P51532 1647 aa19.03■□□□□ 0.64
RP2-201ENST00000218340 CEP162Q5TB80 1403 aa19■□□□□ 0.63
RP2-201ENST00000218340 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
RP2-201ENST00000218340 ATP1B4Q9UN42 357 aaPredicted RBP18.99■□□□□ 0.63
RP2-201ENST00000218340 BAZ1BQ9UIG0 1483 aaKnown RBP18.94■□□□□ 0.62
RP2-201ENST00000218340 ITGAEP38570 1179 aa18.9■□□□□ 0.62
RP2-201ENST00000218340 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
RP2-201ENST00000218340 TNIKQ9UKE5 1360 aa18.86■□□□□ 0.61
RP2-201ENST00000218340 RUSC2Q8N2Y8 1516 aa18.86■□□□□ 0.61
RP2-201ENST00000218340 EEA1Q15075 1411 aa18.86■□□□□ 0.61
RP2-201ENST00000218340 GOLGA3Q08378 1498 aa18.84■□□□□ 0.61
RP2-201ENST00000218340 DIEXFQ68CQ4 756 aaKnown RBP18.83■□□□□ 0.61
RP2-201ENST00000218340 YTHDC1Q96MU7 727 aaKnown RBP18.83■□□□□ 0.6
RP2-201ENST00000218340 CLIP1P30622 1438 aa18.79■□□□□ 0.6
RP2-201ENST00000218340 CENPBP07199 599 aaPredicted RBP18.78■□□□□ 0.6
RP2-201ENST00000218340 ATAD2BQ9ULI0 1458 aa18.75■□□□□ 0.59
RP2-201ENST00000218340 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
RP2-201ENST00000218340 UNC13AQ9UPW8 1703 aa18.67■□□□□ 0.58
RP2-201ENST00000218340 P3H3Q8IVL6 736 aa18.65■□□□□ 0.58
RP2-201ENST00000218340 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.58
RP2-201ENST00000218340 ZNF316A6NFI3 1004 aaPredicted RBP18.59■□□□□ 0.57
RP2-201ENST00000218340 FAM50AQ14320 339 aaKnown RBP18.55■□□□□ 0.56
RP2-201ENST00000218340 RAPGEF2Q9Y4G8 1499 aa18.54■□□□□ 0.56
RP2-201ENST00000218340 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
RP2-201ENST00000218340 EIF4G1Q04637 1599 aaKnown RBP18.5■□□□□ 0.55
RP2-201ENST00000218340 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
RP2-201ENST00000218340 VPS8Q8N3P4 1428 aa18.49■□□□□ 0.55
RP2-201ENST00000218340 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
RP2-201ENST00000218340 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
RP2-201ENST00000218340 GTF3C3Q9Y5Q9 886 aa18.42■□□□□ 0.54
RP2-201ENST00000218340 NEUROD1Q13562 356 aa18.41■□□□□ 0.54
RP2-201ENST00000218340 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
RP2-201ENST00000218340 CUX2O14529 1486 aa18.37■□□□□ 0.53
RP2-201ENST00000218340 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
RP2-201ENST00000218340 NCAPD3P42695 1498 aa18.3■□□□□ 0.52
RP2-201ENST00000218340 MIER1Q8N108 512 aa18.3■□□□□ 0.52
RP2-201ENST00000218340 ARID3CA6NKF2 412 aa18.29■□□□□ 0.52
RP2-201ENST00000218340 CARMIL1Q5VZK9 1371 aa18.27■□□□□ 0.52
RP2-201ENST00000218340 KIF21BO75037 1637 aa18.26■□□□□ 0.51
RP2-201ENST00000218340 CADPSQ9ULU8 1353 aa18.25■□□□□ 0.51
RP2-201ENST00000218340 TOP2BQ02880 1626 aa18.2■□□□□ 0.5
RP2-201ENST00000218340 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
RP2-201ENST00000218340 CCNB3Q8WWL7 1395 aa18.17■□□□□ 0.5
RP2-201ENST00000218340 CUX1P39880 1505 aa18.17■□□□□ 0.5
RP2-201ENST00000218340 CFTRP13569 1480 aa18.15■□□□□ 0.5
RP2-201ENST00000218340 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
RP2-201ENST00000218340 PRXQ9BXM0 1461 aa18.12■□□□□ 0.49
RP2-201ENST00000218340 IGF1RP08069 1367 aa18.12■□□□□ 0.49
RP2-201ENST00000218340 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
RP2-201ENST00000218340 TRIM52Q96A61 297 aa18.11■□□□□ 0.49
RP2-201ENST00000218340 FGD5Q6ZNL6 1462 aa18.09■□□□□ 0.49
RP2-201ENST00000218340 MTUS2Q5JR59 1369 aa18.08■□□□□ 0.49
RP2-201ENST00000218340 FBLN2P98095 1184 aa18.08■□□□□ 0.48
RP2-201ENST00000218340 TDRD9Q8NDG6 1382 aaKnown RBP18.07■□□□□ 0.48
RP2-201ENST00000218340 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
RP2-201ENST00000218340 HIRIP3Q9BW71 556 aaPredicted RBP18.06■□□□□ 0.48
RP2-201ENST00000218340 SIN3AQ96ST3 1273 aa18.04■□□□□ 0.48
RP2-201ENST00000218340 ERICH3Q5RHP9 1530 aa18.04■□□□□ 0.48
RP2-201ENST00000218340 CHIC2Q9UKJ5 165 aa18.04■□□□□ 0.48
RP2-201ENST00000218340 DHX57Q6P158 1386 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms