Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.32□□□□□ -0.44
HTR1AP08908 AC090114.2-201ENST00000608477 7054 ntBASIC12.32□□□□□ -0.44
HTR1AP08908 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HTR1AP08908 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HTR1AP08908 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC12.32□□□□□ -0.44
HTR1AP08908 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
HTR1AP08908 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HTR1AP08908 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC12.31□□□□□ -0.44
HTR1AP08908 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.31□□□□□ -0.44
HTR1AP08908 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.31□□□□□ -0.44
HTR1AP08908 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.31□□□□□ -0.44
HTR1AP08908 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.31□□□□□ -0.44
HTR1AP08908 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
HTR1AP08908 AC008805.1-201ENST00000590892 364 ntBASIC12.31□□□□□ -0.44
HTR1AP08908 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.31□□□□□ -0.44
HTR1AP08908 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HTR1AP08908 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HTR1AP08908 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 POM121L1P-202ENST00000605258 1835 ntBASIC12.31□□□□□ -0.44
HTR1AP08908 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
HTR1AP08908 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC12.31□□□□□ -0.44
HTR1AP08908 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.31□□□□□ -0.44
HTR1AP08908 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HTR1AP08908 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HTR1AP08908 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
HTR1AP08908 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HTR1AP08908 FAM95B1-212ENST00000592873 4692 ntBASIC12.31□□□□□ -0.44
HTR1AP08908 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HTR1AP08908 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC12.3□□□□□ -0.44
HTR1AP08908 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.3□□□□□ -0.44
HTR1AP08908 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
HTR1AP08908 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC12.3□□□□□ -0.44
HTR1AP08908 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
HTR1AP08908 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
HTR1AP08908 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC12.3□□□□□ -0.44
HTR1AP08908 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.3□□□□□ -0.44
HTR1AP08908 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.3□□□□□ -0.44
HTR1AP08908 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.3□□□□□ -0.44
HTR1AP08908 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.3□□□□□ -0.44
HTR1AP08908 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.3□□□□□ -0.44
HTR1AP08908 AC011742.3-201ENST00000439053 820 ntBASIC12.3□□□□□ -0.44
HTR1AP08908 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
HTR1AP08908 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.3□□□□□ -0.44
HTR1AP08908 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.3□□□□□ -0.44
HTR1AP08908 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
HTR1AP08908 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HTR1AP08908 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.3□□□□□ -0.44
HTR1AP08908 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC12.3□□□□□ -0.44
HTR1AP08908 FO681491.1-201ENST00000623586 3260 ntTSL 2 BASIC12.3□□□□□ -0.44
HTR1AP08908 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
HTR1AP08908 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.3□□□□□ -0.44
HTR1AP08908 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.3□□□□□ -0.44
HTR1AP08908 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HTR1AP08908 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HTR1AP08908 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
HTR1AP08908 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HTR1AP08908 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC12.29□□□□□ -0.44
HTR1AP08908 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HTR1AP08908 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
HTR1AP08908 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HTR1AP08908 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms