RNA–Protein interactions for RNA: ENST00000394890.6

P4HA1-204, Transcript of prolyl 4-hydroxylase subunit alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene P4HA1, Length 2,844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HA1-204ENST00000394890 NISCHQ9Y2I1 1504 aa27.15■■□□□ 1.94
P4HA1-204ENST00000394890 CCDC180Q9P1Z9 1646 aa23.4■■□□□ 1.34
P4HA1-204ENST00000394890 ZCCHC6Q5VYS8 1495 aaKnown RBP22.9■■□□□ 1.26
P4HA1-204ENST00000394890 SHROOM4Q9ULL8 1493 aa22.58■■□□□ 1.2
P4HA1-204ENST00000394890 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.18
P4HA1-204ENST00000394890 DCAF8L2P0C7V8 631 aa22.36■■□□□ 1.17
P4HA1-204ENST00000394890 MYO15BQ96JP2 1530 aa21.94■■□□□ 1.1
P4HA1-204ENST00000394890 SUPT5HO00267 1087 aaKnown RBP21.91■■□□□ 1.1
P4HA1-204ENST00000394890 ABCC9O60706 1549 aa21.87■■□□□ 1.09
P4HA1-204ENST00000394890 NACADO15069 1562 aa21.71■■□□□ 1.07
P4HA1-204ENST00000394890 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
P4HA1-204ENST00000394890 RB1CC1Q8TDY2 1594 aa21.43■■□□□ 1.02
P4HA1-204ENST00000394890 RSF1Q96T23 1441 aaPredicted RBP21.27■■□□□ 1
P4HA1-204ENST00000394890 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
P4HA1-204ENST00000394890 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
P4HA1-204ENST00000394890 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
P4HA1-204ENST00000394890 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
P4HA1-204ENST00000394890 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
P4HA1-204ENST00000394890 HRCP23327 699 aa20.9■□□□□ 0.94
P4HA1-204ENST00000394890 WIZO95785 1651 aa20.89■□□□□ 0.93
P4HA1-204ENST00000394890 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
P4HA1-204ENST00000394890 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
P4HA1-204ENST00000394890 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
P4HA1-204ENST00000394890 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
P4HA1-204ENST00000394890 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
P4HA1-204ENST00000394890 PELP1Q8IZL8 1130 aaKnown RBP20.55■□□□□ 0.88
P4HA1-204ENST00000394890 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
P4HA1-204ENST00000394890 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
P4HA1-204ENST00000394890 SMARCA2P51531 1590 aa20.48■□□□□ 0.87
P4HA1-204ENST00000394890 CCDC88BA6NC98 1476 aa20.48■□□□□ 0.87
P4HA1-204ENST00000394890 PEG3Q9GZU2 1588 aa20.47■□□□□ 0.87
P4HA1-204ENST00000394890 LOC105371045A0A1W2PR82 267 aa20.45■□□□□ 0.86
P4HA1-204ENST00000394890 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
P4HA1-204ENST00000394890 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
P4HA1-204ENST00000394890 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
P4HA1-204ENST00000394890 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
P4HA1-204ENST00000394890 ABCC8Q09428 1581 aa20.22■□□□□ 0.83
P4HA1-204ENST00000394890 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
P4HA1-204ENST00000394890 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
P4HA1-204ENST00000394890 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
P4HA1-204ENST00000394890 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
P4HA1-204ENST00000394890 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
P4HA1-204ENST00000394890 TRIM26Q12899 539 aaPredicted RBP19.97■□□□□ 0.79
P4HA1-204ENST00000394890 SOGA1O94964 1423 aa19.93■□□□□ 0.78
P4HA1-204ENST00000394890 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
P4HA1-204ENST00000394890 EEA1Q15075 1411 aa19.86■□□□□ 0.77
P4HA1-204ENST00000394890 RUSC2Q8N2Y8 1516 aa19.85■□□□□ 0.77
P4HA1-204ENST00000394890 CSRNP3Q8WYN3 585 aa19.78■□□□□ 0.76
P4HA1-204ENST00000394890 CC2D2AQ9P2K1 1620 aa19.77■□□□□ 0.75
P4HA1-204ENST00000394890 MYT1Q01538 1121 aa19.76■□□□□ 0.75
P4HA1-204ENST00000394890 CFTRP13569 1480 aa19.76■□□□□ 0.75
P4HA1-204ENST00000394890 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
P4HA1-204ENST00000394890 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
P4HA1-204ENST00000394890 TNIKQ9UKE5 1360 aa19.69■□□□□ 0.74
P4HA1-204ENST00000394890 GOLGA3Q08378 1498 aa19.65■□□□□ 0.74
P4HA1-204ENST00000394890 CEP162Q5TB80 1403 aa19.64■□□□□ 0.73
P4HA1-204ENST00000394890 CUX1P39880 1505 aa19.64■□□□□ 0.73
P4HA1-204ENST00000394890 PRDM2Q13029 1718 aa19.63■□□□□ 0.73
P4HA1-204ENST00000394890 KIF21BO75037 1637 aa19.62■□□□□ 0.73
P4HA1-204ENST00000394890 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
P4HA1-204ENST00000394890 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
P4HA1-204ENST00000394890 UBTFP17480 764 aaKnown RBP19.58■□□□□ 0.72
P4HA1-204ENST00000394890 ZEB1P37275 1124 aaPredicted RBP19.55■□□□□ 0.72
P4HA1-204ENST00000394890 RAPGEF2Q9Y4G8 1499 aa19.49■□□□□ 0.71
P4HA1-204ENST00000394890 NEUROD1Q13562 356 aa19.44■□□□□ 0.7
P4HA1-204ENST00000394890 PRXQ9BXM0 1461 aa19.42■□□□□ 0.7
P4HA1-204ENST00000394890 KIF27Q86VH2 1401 aa19.41■□□□□ 0.7
P4HA1-204ENST00000394890 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
P4HA1-204ENST00000394890 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
P4HA1-204ENST00000394890 ACIN1Q9UKV3 1341 aaKnown RBP19.39■□□□□ 0.69
P4HA1-204ENST00000394890 CLIP1P30622 1438 aa19.38■□□□□ 0.69
P4HA1-204ENST00000394890 NESP48681 1621 aa19.36■□□□□ 0.69
P4HA1-204ENST00000394890 GTF3C3Q9Y5Q9 886 aa19.36■□□□□ 0.69
P4HA1-204ENST00000394890 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
P4HA1-204ENST00000394890 CUX2O14529 1486 aa19.3■□□□□ 0.68
P4HA1-204ENST00000394890 LAMC3Q9Y6N6 1575 aa19.29■□□□□ 0.68
P4HA1-204ENST00000394890 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
P4HA1-204ENST00000394890 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
P4HA1-204ENST00000394890 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
P4HA1-204ENST00000394890 IGF1RP08069 1367 aa19.24■□□□□ 0.67
P4HA1-204ENST00000394890 TOPBP1Q92547 1522 aa19.24■□□□□ 0.67
P4HA1-204ENST00000394890 TTBK1Q5TCY1 1321 aaPredicted RBP19.23■□□□□ 0.67
P4HA1-204ENST00000394890 RANGAP1P46060 587 aaPredicted RBP19.21■□□□□ 0.67
P4HA1-204ENST00000394890 POLA1P09884 1462 aaPredicted RBP19.18■□□□□ 0.66
P4HA1-204ENST00000394890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
P4HA1-204ENST00000394890 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
P4HA1-204ENST00000394890 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
P4HA1-204ENST00000394890 URB2Q14146 1524 aaKnown RBP19.16■□□□□ 0.66
P4HA1-204ENST00000394890 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
P4HA1-204ENST00000394890 CARMIL1Q5VZK9 1371 aa19.13■□□□□ 0.65
P4HA1-204ENST00000394890 PDS5BQ9NTI5 1447 aa19.13■□□□□ 0.65
P4HA1-204ENST00000394890 CCER1Q8TC90 406 aaPredicted RBP19.11■□□□□ 0.65
P4HA1-204ENST00000394890 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.64
P4HA1-204ENST00000394890 ARHGAP35Q9NRY4 1499 aa19.07■□□□□ 0.64
P4HA1-204ENST00000394890 WDR97A6NE52 1622 aa19.05■□□□□ 0.64
P4HA1-204ENST00000394890 APLP2Q06481 763 aa19.05■□□□□ 0.64
P4HA1-204ENST00000394890 CUL7Q14999 1698 aa18.98■□□□□ 0.63
P4HA1-204ENST00000394890 CENPBP07199 599 aaPredicted RBP18.97■□□□□ 0.63
P4HA1-204ENST00000394890 ABCA5Q8WWZ7 1642 aa18.97■□□□□ 0.63
P4HA1-204ENST00000394890 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms