RNA–Protein interactions for RNA: ENST00000392427.7

EPB41L2-204, Transcript of erythrocyte membrane protein band 4.1 like 2, humanhuman

TSL 1 (best) BASIC

Gene EPB41L2, Length 3,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L2-204ENST00000392427 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
EPB41L2-204ENST00000392427 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
EPB41L2-204ENST00000392427 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
EPB41L2-204ENST00000392427 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
EPB41L2-204ENST00000392427 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
EPB41L2-204ENST00000392427 ABCC9O60706 1549 aa23.68■■□□□ 1.38
EPB41L2-204ENST00000392427 DCAF1Q9Y4B6 1507 aa23.51■■□□□ 1.35
EPB41L2-204ENST00000392427 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
EPB41L2-204ENST00000392427 SCRIBQ14160 1630 aa23.23■■□□□ 1.31
EPB41L2-204ENST00000392427 MYO15BQ96JP2 1530 aa23.05■■□□□ 1.28
EPB41L2-204ENST00000392427 NACADO15069 1562 aa23.03■■□□□ 1.28
EPB41L2-204ENST00000392427 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
EPB41L2-204ENST00000392427 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
EPB41L2-204ENST00000392427 RSF1Q96T23 1441 aaPredicted RBP22.56■■□□□ 1.2
EPB41L2-204ENST00000392427 PABPN1Q86U42 306 aaKnown RBP eCLIP22.55■■□□□ 1.29e-14■□□□□ 10.8
EPB41L2-204ENST00000392427 UNC13AQ9UPW8 1703 aa22.52■■□□□ 1.2
EPB41L2-204ENST00000392427 MROH2BQ7Z745 1585 aa22.42■■□□□ 1.18
EPB41L2-204ENST00000392427 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
EPB41L2-204ENST00000392427 WIZO95785 1651 aa22.27■■□□□ 1.16
EPB41L2-204ENST00000392427 BICRAQ9NZM4 1560 aa22.27■■□□□ 1.16
EPB41L2-204ENST00000392427 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
EPB41L2-204ENST00000392427 SMARCA4P51532 1647 aa22.08■■□□□ 1.13
EPB41L2-204ENST00000392427 TRIM41Q8WV44 630 aa21.84■■□□□ 1.09
EPB41L2-204ENST00000392427 TOP2AP11388 1531 aaKnown RBP21.83■■□□□ 1.09
EPB41L2-204ENST00000392427 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
EPB41L2-204ENST00000392427 CCDC88BA6NC98 1476 aa21.78■■□□□ 1.08
EPB41L2-204ENST00000392427 FAM9AQ8IZU1 332 aaPredicted RBP21.77■■□□□ 1.08
EPB41L2-204ENST00000392427 SMARCA2P51531 1590 aa21.73■■□□□ 1.07
EPB41L2-204ENST00000392427 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
EPB41L2-204ENST00000392427 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
EPB41L2-204ENST00000392427 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
EPB41L2-204ENST00000392427 PEG3Q9GZU2 1588 aa21.6■■□□□ 1.05
EPB41L2-204ENST00000392427 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.05
EPB41L2-204ENST00000392427 ABCC8Q09428 1581 aa21.58■■□□□ 1.04
EPB41L2-204ENST00000392427 NCAPD3P42695 1498 aa21.33■■□□□ 1
EPB41L2-204ENST00000392427 HMGXB3Q12766 1538 aa21.25■□□□□ 0.99
EPB41L2-204ENST00000392427 CC2D2AQ9P2K1 1620 aa21.25■□□□□ 0.99
EPB41L2-204ENST00000392427 SOGA1O94964 1423 aa21.23■□□□□ 0.99
EPB41L2-204ENST00000392427 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
EPB41L2-204ENST00000392427 RUSC2Q8N2Y8 1516 aa21.18■□□□□ 0.98
EPB41L2-204ENST00000392427 SYNJ1O43426 1573 aa21.17■□□□□ 0.98
EPB41L2-204ENST00000392427 PCGF6Q9BYE7 350 aa21.1■□□□□ 0.97
EPB41L2-204ENST00000392427 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
EPB41L2-204ENST00000392427 CFTRP13569 1480 aa20.99■□□□□ 0.95
EPB41L2-204ENST00000392427 CSRNP3Q8WYN3 585 aa20.99■□□□□ 0.95
EPB41L2-204ENST00000392427 PPARGC1BQ86YN6 1023 aaKnown RBP20.97■□□□□ 0.95
EPB41L2-204ENST00000392427 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
EPB41L2-204ENST00000392427 CADPSQ9ULU8 1353 aa20.92■□□□□ 0.94
EPB41L2-204ENST00000392427 CUX1P39880 1505 aa20.9■□□□□ 0.94
EPB41L2-204ENST00000392427 NESP48681 1621 aa20.89■□□□□ 0.93
EPB41L2-204ENST00000392427 TOP2BQ02880 1626 aa20.89■□□□□ 0.93
EPB41L2-204ENST00000392427 RANGAP1P46060 587 aaPredicted RBP20.85■□□□□ 0.93
EPB41L2-204ENST00000392427 EEA1Q15075 1411 aa20.82■□□□□ 0.92
EPB41L2-204ENST00000392427 BIVM-ERCC5R4GMW8 1640 aa20.81■□□□□ 0.92
EPB41L2-204ENST00000392427 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
EPB41L2-204ENST00000392427 CEP162Q5TB80 1403 aa20.76■□□□□ 0.91
EPB41L2-204ENST00000392427 GOLGA3Q08378 1498 aa20.74■□□□□ 0.91
EPB41L2-204ENST00000392427 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
EPB41L2-204ENST00000392427 PRDM2Q13029 1718 aa20.74■□□□□ 0.91
EPB41L2-204ENST00000392427 RAPGEF2Q9Y4G8 1499 aa20.72■□□□□ 0.91
EPB41L2-204ENST00000392427 TRIM26Q12899 539 aaPredicted RBP20.72■□□□□ 0.91
EPB41L2-204ENST00000392427 TNIKQ9UKE5 1360 aa20.71■□□□□ 0.91
EPB41L2-204ENST00000392427 CEP164Q9UPV0 1460 aa20.68■□□□□ 0.9
EPB41L2-204ENST00000392427 FGD5Q6ZNL6 1462 aa20.64■□□□□ 0.9
EPB41L2-204ENST00000392427 KIF21BO75037 1637 aa20.62■□□□□ 0.89
EPB41L2-204ENST00000392427 CUX2O14529 1486 aa20.61■□□□□ 0.89
EPB41L2-204ENST00000392427 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
EPB41L2-204ENST00000392427 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
EPB41L2-204ENST00000392427 TOPBP1Q92547 1522 aa20.52■□□□□ 0.88
EPB41L2-204ENST00000392427 CLIP1P30622 1438 aa20.52■□□□□ 0.88
EPB41L2-204ENST00000392427 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
EPB41L2-204ENST00000392427 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
EPB41L2-204ENST00000392427 HRCP23327 699 aa20.5■□□□□ 0.87
EPB41L2-204ENST00000392427 URB2Q14146 1524 aaKnown RBP20.49■□□□□ 0.87
EPB41L2-204ENST00000392427 POLA1P09884 1462 aaPredicted RBP20.48■□□□□ 0.87
EPB41L2-204ENST00000392427 DNMBPQ6XZF7 1577 aa20.48■□□□□ 0.87
EPB41L2-204ENST00000392427 KIF21AQ7Z4S6 1674 aa20.47■□□□□ 0.87
EPB41L2-204ENST00000392427 IGF1RP08069 1367 aa20.46■□□□□ 0.87
EPB41L2-204ENST00000392427 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
EPB41L2-204ENST00000392427 ERICH3Q5RHP9 1530 aa20.39■□□□□ 0.85
EPB41L2-204ENST00000392427 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
EPB41L2-204ENST00000392427 CARMIL1Q5VZK9 1371 aa20.37■□□□□ 0.85
EPB41L2-204ENST00000392427 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
EPB41L2-204ENST00000392427 VPS8Q8N3P4 1428 aa20.3■□□□□ 0.84
EPB41L2-204ENST00000392427 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
EPB41L2-204ENST00000392427 ARAP1Q96P48 1450 aa20.27■□□□□ 0.83
EPB41L2-204ENST00000392427 APLP2Q06481 763 aa20.25■□□□□ 0.83
EPB41L2-204ENST00000392427 ARHGAP35Q9NRY4 1499 aa20.21■□□□□ 0.83
EPB41L2-204ENST00000392427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.19■□□□□ 0.82
EPB41L2-204ENST00000392427 WDR97A6NE52 1622 aa20.18■□□□□ 0.82
EPB41L2-204ENST00000392427 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
EPB41L2-204ENST00000392427 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
EPB41L2-204ENST00000392427 ERCC6Q03468 1493 aa20.17■□□□□ 0.82
EPB41L2-204ENST00000392427 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.828e-11■■■■□ 19.8
EPB41L2-204ENST00000392427 KANK4Q5T7N3 995 aaPredicted RBP20.15■□□□□ 0.82
EPB41L2-204ENST00000392427 TARBP1Q13395 1621 aaKnown RBP20.13■□□□□ 0.81
EPB41L2-204ENST00000392427 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
EPB41L2-204ENST00000392427 ATP1B4Q9UN42 357 aaPredicted RBP20.12■□□□□ 0.81
EPB41L2-204ENST00000392427 HNRNPUL2Q1KMD3 747 aaKnown RBP20.11■□□□□ 0.81
EPB41L2-204ENST00000392427 ZNF608Q9ULD9 1512 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms