Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 VENTXP1-201ENST00000569334 2716 ntBASIC11.88□□□□□ -0.51
NPIPB4C9JG80 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 Z69890.1-201ENST00000382990 339 ntBASIC11.87□□□□□ -0.51
NPIPB4C9JG80 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 AC078991.1-201ENST00000437297 610 ntBASIC11.87□□□□□ -0.51
NPIPB4C9JG80 RPS15P5-201ENST00000449885 432 ntBASIC11.87□□□□□ -0.51
NPIPB4C9JG80 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 AC012158.2-201ENST00000536546 354 ntBASIC11.87□□□□□ -0.51
NPIPB4C9JG80 CR383656.3-201ENST00000551315 183 ntBASIC11.87□□□□□ -0.51
NPIPB4C9JG80 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 FOXN3-AS2-201ENST00000554071 1262 ntBASIC11.87□□□□□ -0.51
NPIPB4C9JG80 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 AC107464.3-201ENST00000609172 737 ntBASIC11.87□□□□□ -0.51
NPIPB4C9JG80 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 AC002044.2-201ENST00000624910 970 ntBASIC11.87□□□□□ -0.51
NPIPB4C9JG80 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 KRT8P5-201ENST00000592443 1458 ntBASIC11.87□□□□□ -0.51
NPIPB4C9JG80 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NPIPB4C9JG80 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AC008806.1-201ENST00000624962 2443 ntBASIC11.86□□□□□ -0.51
NPIPB4C9JG80 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AC098935.1-201ENST00000446057 611 ntBASIC11.86□□□□□ -0.51
NPIPB4C9JG80 CXXC1P1-202ENST00000489409 1212 ntBASIC11.86□□□□□ -0.51
NPIPB4C9JG80 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 MT2A-202ENST00000561491 581 ntTSL 2 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC11.86□□□□□ -0.51
NPIPB4C9JG80 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms