RNA–Protein interactions for RNA: ENST00000366733.5

MRPL55-207, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-207ENST00000366733 NISCHQ9Y2I1 1504 aa31.21■■■□□ 2.59
MRPL55-207ENST00000366733 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
MRPL55-207ENST00000366733 ABCC9O60706 1549 aa26.26■■□□□ 1.79
MRPL55-207ENST00000366733 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
MRPL55-207ENST00000366733 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
MRPL55-207ENST00000366733 MYO15BQ96JP2 1530 aa25.85■■□□□ 1.73
MRPL55-207ENST00000366733 NACADO15069 1562 aa25.72■■□□□ 1.71
MRPL55-207ENST00000366733 DCAF8L2P0C7V8 631 aa25.66■■□□□ 1.7
MRPL55-207ENST00000366733 RB1CC1Q8TDY2 1594 aa25.56■■□□□ 1.68
MRPL55-207ENST00000366733 SCRIBQ14160 1630 aa25.02■■□□□ 1.6
MRPL55-207ENST00000366733 SHROOM4Q9ULL8 1493 aa24.85■■□□□ 1.57
MRPL55-207ENST00000366733 UNC13AQ9UPW8 1703 aa24.85■■□□□ 1.57
MRPL55-207ENST00000366733 BICRAQ9NZM4 1560 aa24.79■■□□□ 1.56
MRPL55-207ENST00000366733 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
MRPL55-207ENST00000366733 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
MRPL55-207ENST00000366733 CECR2Q9BXF3 1484 aa24.21■■□□□ 1.47
MRPL55-207ENST00000366733 BAZ1AQ9NRL2 1556 aaPredicted RBP24.14■■□□□ 1.45
MRPL55-207ENST00000366733 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.44
MRPL55-207ENST00000366733 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
MRPL55-207ENST00000366733 MROH2BQ7Z745 1585 aa24.03■■□□□ 1.44
MRPL55-207ENST00000366733 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
MRPL55-207ENST00000366733 PEG3Q9GZU2 1588 aa23.9■■□□□ 1.42
MRPL55-207ENST00000366733 ATAD2BQ9ULI0 1458 aa23.83■■□□□ 1.41
MRPL55-207ENST00000366733 SMARCA2P51531 1590 aa23.81■■□□□ 1.4
MRPL55-207ENST00000366733 CC2D2AQ9P2K1 1620 aa23.79■■□□□ 1.4
MRPL55-207ENST00000366733 NCAPD3P42695 1498 aa23.76■■□□□ 1.39
MRPL55-207ENST00000366733 WIZO95785 1651 aa23.73■■□□□ 1.39
MRPL55-207ENST00000366733 SUPT5HO00267 1087 aaKnown RBP23.68■■□□□ 1.38
MRPL55-207ENST00000366733 HMGXB3Q12766 1538 aa23.68■■□□□ 1.38
MRPL55-207ENST00000366733 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
MRPL55-207ENST00000366733 DNAJC5BQ9UF47 199 aa23.62■■□□□ 1.37
MRPL55-207ENST00000366733 TOP2AP11388 1531 aaKnown RBP23.61■■□□□ 1.37
MRPL55-207ENST00000366733 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
MRPL55-207ENST00000366733 CCDC88BA6NC98 1476 aa23.31■■□□□ 1.32
MRPL55-207ENST00000366733 CFTRP13569 1480 aa23.07■■□□□ 1.28
MRPL55-207ENST00000366733 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
MRPL55-207ENST00000366733 LAMC3Q9Y6N6 1575 aa22.97■■□□□ 1.27
MRPL55-207ENST00000366733 NESP48681 1621 aa22.9■■□□□ 1.26
MRPL55-207ENST00000366733 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
MRPL55-207ENST00000366733 PRDM2Q13029 1718 aa22.78■■□□□ 1.24
MRPL55-207ENST00000366733 FANCD2Q9BXW9 1451 aa22.77■■□□□ 1.24
MRPL55-207ENST00000366733 CEP164Q9UPV0 1460 aa22.68■■□□□ 1.22
MRPL55-207ENST00000366733 WRNQ14191 1432 aaPredicted RBP eCLIP22.59■■□□□ 1.21
MRPL55-207ENST00000366733 ERCC6Q03468 1493 aa22.59■■□□□ 1.21
MRPL55-207ENST00000366733 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.21
MRPL55-207ENST00000366733 ABCC8Q09428 1581 aa22.56■■□□□ 1.2
MRPL55-207ENST00000366733 MRC2Q9UBG0 1479 aa22.55■■□□□ 1.2
MRPL55-207ENST00000366733 CUX1P39880 1505 aa22.52■■□□□ 1.19
MRPL55-207ENST00000366733 URB2Q14146 1524 aaKnown RBP22.51■■□□□ 1.19
MRPL55-207ENST00000366733 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
MRPL55-207ENST00000366733 WDR62O43379 1518 aa22.47■■□□□ 1.19
MRPL55-207ENST00000366733 TOPBP1Q92547 1522 aa22.47■■□□□ 1.19
MRPL55-207ENST00000366733 SYNJ1O43426 1573 aa22.47■■□□□ 1.19
MRPL55-207ENST00000366733 TOP2BQ02880 1626 aa22.47■■□□□ 1.19
MRPL55-207ENST00000366733 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
MRPL55-207ENST00000366733 BIVM-ERCC5R4GMW8 1640 aa22.45■■□□□ 1.18
MRPL55-207ENST00000366733 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
MRPL55-207ENST00000366733 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
MRPL55-207ENST00000366733 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
MRPL55-207ENST00000366733 CUX2O14529 1486 aa22.27■■□□□ 1.16
MRPL55-207ENST00000366733 SOGA1O94964 1423 aa22.23■■□□□ 1.15
MRPL55-207ENST00000366733 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
MRPL55-207ENST00000366733 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
MRPL55-207ENST00000366733 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
MRPL55-207ENST00000366733 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
MRPL55-207ENST00000366733 WDR97A6NE52 1622 aa22.1■■□□□ 1.13
MRPL55-207ENST00000366733 EEA1Q15075 1411 aa22.08■■□□□ 1.13
MRPL55-207ENST00000366733 KIF27Q86VH2 1401 aa22.08■■□□□ 1.13
MRPL55-207ENST00000366733 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.12
MRPL55-207ENST00000366733 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.12
MRPL55-207ENST00000366733 TDRD9Q8NDG6 1382 aaKnown RBP22.01■■□□□ 1.11
MRPL55-207ENST00000366733 RUSC2Q8N2Y8 1516 aa22■■□□□ 1.11
MRPL55-207ENST00000366733 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
MRPL55-207ENST00000366733 AQRO60306 1485 aaKnown RBP eCLIP21.96■■□□□ 1.118e-7■■■■■ 27.9
MRPL55-207ENST00000366733 IGF1RP08069 1367 aa21.95■■□□□ 1.1
MRPL55-207ENST00000366733 ERICH3Q5RHP9 1530 aa21.94■■□□□ 1.1
MRPL55-207ENST00000366733 EIF4G3O43432 1585 aaKnown RBP21.94■■□□□ 1.1
MRPL55-207ENST00000366733 GRIN2BQ13224 1484 aa21.93■■□□□ 1.1
MRPL55-207ENST00000366733 CSRNP3Q8WYN3 585 aa21.91■■□□□ 1.1
MRPL55-207ENST00000366733 PRXQ9BXM0 1461 aa21.85■■□□□ 1.09
MRPL55-207ENST00000366733 FAM9AQ8IZU1 332 aaPredicted RBP21.83■■□□□ 1.09
MRPL55-207ENST00000366733 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
MRPL55-207ENST00000366733 CUL7Q14999 1698 aa21.8■■□□□ 1.08
MRPL55-207ENST00000366733 PBRM1Q86U86 1689 aa21.8■■□□□ 1.08
MRPL55-207ENST00000366733 CARMIL1Q5VZK9 1371 aa21.79■■□□□ 1.08
MRPL55-207ENST00000366733 FHAD1B1AJZ9 1412 aa21.79■■□□□ 1.08
MRPL55-207ENST00000366733 SNAPC4Q5SXM2 1469 aa21.78■■□□□ 1.08
MRPL55-207ENST00000366733 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
MRPL55-207ENST00000366733 KIF21BO75037 1637 aa21.76■■□□□ 1.07
MRPL55-207ENST00000366733 RAPGEF2Q9Y4G8 1499 aa21.73■■□□□ 1.07
MRPL55-207ENST00000366733 SYNJ2O15056 1496 aa21.72■■□□□ 1.07
MRPL55-207ENST00000366733 GOLGA3Q08378 1498 aa21.68■■□□□ 1.06
MRPL55-207ENST00000366733 GRIN2AQ12879 1464 aa21.64■■□□□ 1.05
MRPL55-207ENST00000366733 CHMP7Q8WUX9 453 aaPredicted RBP21.6■■□□□ 1.05
MRPL55-207ENST00000366733 NUP160Q12769 1436 aa21.56■■□□□ 1.04
MRPL55-207ENST00000366733 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
MRPL55-207ENST00000366733 LOC105371045A0A1W2PR82 267 aa21.53■■□□□ 1.04
MRPL55-207ENST00000366733 FBLN2P98095 1184 aa21.5■■□□□ 1.03
MRPL55-207ENST00000366733 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
MRPL55-207ENST00000366733 KIAA0586Q9BVV6 1533 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms