RNA–Protein interactions for RNA: ENST00000489409.1

CXXC1P1-202, Transcript of CXXC finger protein 1 pseudogene 1, humanhuman

BASIC

Gene CXXC1P1, Length 1,212 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1P1-202ENST00000489409 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
CXXC1P1-202ENST00000489409 CCDC180Q9P1Z9 1646 aa27.97■■■□□ 2.07
CXXC1P1-202ENST00000489409 ABCC9O60706 1549 aa27.19■■□□□ 1.94
CXXC1P1-202ENST00000489409 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
CXXC1P1-202ENST00000489409 DCAF8L2P0C7V8 631 aa26.24■■□□□ 1.79
CXXC1P1-202ENST00000489409 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
CXXC1P1-202ENST00000489409 RB1CC1Q8TDY2 1594 aa26.08■■□□□ 1.77
CXXC1P1-202ENST00000489409 NACADO15069 1562 aa26.05■■□□□ 1.76
CXXC1P1-202ENST00000489409 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
CXXC1P1-202ENST00000489409 UNC13AQ9UPW8 1703 aa25.58■■□□□ 1.69
CXXC1P1-202ENST00000489409 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
CXXC1P1-202ENST00000489409 PABPN1Q86U42 306 aaKnown RBP eCLIP25.43■■□□□ 1.66
CXXC1P1-202ENST00000489409 BICRAQ9NZM4 1560 aa25.2■■□□□ 1.62
CXXC1P1-202ENST00000489409 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
CXXC1P1-202ENST00000489409 DNAJC5BQ9UF47 199 aa24.93■■□□□ 1.58
CXXC1P1-202ENST00000489409 EIF4G1Q04637 1599 aaKnown RBP24.6■■□□□ 1.53
CXXC1P1-202ENST00000489409 CC2D2AQ9P2K1 1620 aa24.54■■□□□ 1.52
CXXC1P1-202ENST00000489409 BAZ1AQ9NRL2 1556 aaPredicted RBP24.43■■□□□ 1.5
CXXC1P1-202ENST00000489409 CECR2Q9BXF3 1484 aa24.42■■□□□ 1.5
CXXC1P1-202ENST00000489409 SMARCA4P51532 1647 aa24.42■■□□□ 1.5
CXXC1P1-202ENST00000489409 MROH2BQ7Z745 1585 aa24.27■■□□□ 1.48
CXXC1P1-202ENST00000489409 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
CXXC1P1-202ENST00000489409 RSF1Q96T23 1441 aaPredicted RBP24.13■■□□□ 1.45
CXXC1P1-202ENST00000489409 WIZO95785 1651 aa24.13■■□□□ 1.45
CXXC1P1-202ENST00000489409 SMARCA2P51531 1590 aa24.12■■□□□ 1.45
CXXC1P1-202ENST00000489409 ATAD2BQ9ULI0 1458 aa24.04■■□□□ 1.44
CXXC1P1-202ENST00000489409 HMGXB3Q12766 1538 aa23.98■■□□□ 1.43
CXXC1P1-202ENST00000489409 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
CXXC1P1-202ENST00000489409 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
CXXC1P1-202ENST00000489409 TOP2AP11388 1531 aaKnown RBP23.88■■□□□ 1.41
CXXC1P1-202ENST00000489409 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
CXXC1P1-202ENST00000489409 CCDC88BA6NC98 1476 aa23.5■■□□□ 1.35
CXXC1P1-202ENST00000489409 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
CXXC1P1-202ENST00000489409 NESP48681 1621 aa23.47■■□□□ 1.35
CXXC1P1-202ENST00000489409 PRDM2Q13029 1718 aa23.45■■□□□ 1.34
CXXC1P1-202ENST00000489409 LAMC3Q9Y6N6 1575 aa23.38■■□□□ 1.33
CXXC1P1-202ENST00000489409 CADPSQ9ULU8 1353 aa23.3■■□□□ 1.32
CXXC1P1-202ENST00000489409 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.32
CXXC1P1-202ENST00000489409 CFTRP13569 1480 aa23.24■■□□□ 1.31
CXXC1P1-202ENST00000489409 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
CXXC1P1-202ENST00000489409 CUX2O14529 1486 aa23.15■■□□□ 1.3
CXXC1P1-202ENST00000489409 THOC2Q8NI27 1593 aaKnown RBP23.07■■□□□ 1.28
CXXC1P1-202ENST00000489409 FANCD2Q9BXW9 1451 aa23.05■■□□□ 1.28
CXXC1P1-202ENST00000489409 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
CXXC1P1-202ENST00000489409 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
CXXC1P1-202ENST00000489409 WDR62O43379 1518 aa22.88■■□□□ 1.25
CXXC1P1-202ENST00000489409 ABCC8Q09428 1581 aa22.87■■□□□ 1.25
CXXC1P1-202ENST00000489409 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
CXXC1P1-202ENST00000489409 BIVM-ERCC5R4GMW8 1640 aa22.81■■□□□ 1.24
CXXC1P1-202ENST00000489409 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
CXXC1P1-202ENST00000489409 SYNJ1O43426 1573 aa22.77■■□□□ 1.24
CXXC1P1-202ENST00000489409 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.24
CXXC1P1-202ENST00000489409 TOP2BQ02880 1626 aa22.77■■□□□ 1.24
CXXC1P1-202ENST00000489409 CUX1P39880 1505 aa22.77■■□□□ 1.24
CXXC1P1-202ENST00000489409 TOPBP1Q92547 1522 aa22.74■■□□□ 1.23
CXXC1P1-202ENST00000489409 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
CXXC1P1-202ENST00000489409 POLA1P09884 1462 aaPredicted RBP22.57■■□□□ 1.2
CXXC1P1-202ENST00000489409 WDR97A6NE52 1622 aa22.55■■□□□ 1.2
CXXC1P1-202ENST00000489409 IFT140Q96RY7 1462 aa22.54■■□□□ 1.2
CXXC1P1-202ENST00000489409 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
CXXC1P1-202ENST00000489409 DNAJC5Q9H3Z4 198 aa22.54■■□□□ 1.2
CXXC1P1-202ENST00000489409 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
CXXC1P1-202ENST00000489409 TARBP1Q13395 1621 aaKnown RBP22.51■■□□□ 1.19
CXXC1P1-202ENST00000489409 ZNF608Q9ULD9 1512 aaPredicted RBP22.44■■□□□ 1.18
CXXC1P1-202ENST00000489409 SOGA1O94964 1423 aa22.43■■□□□ 1.18
CXXC1P1-202ENST00000489409 RAD54L2Q9Y4B4 1467 aa22.42■■□□□ 1.18
CXXC1P1-202ENST00000489409 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
CXXC1P1-202ENST00000489409 EIF4G3O43432 1585 aaKnown RBP22.37■■□□□ 1.17
CXXC1P1-202ENST00000489409 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
CXXC1P1-202ENST00000489409 ABCA5Q8WWZ7 1642 aa22.36■■□□□ 1.17
CXXC1P1-202ENST00000489409 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.17
CXXC1P1-202ENST00000489409 TDRD9Q8NDG6 1382 aaKnown RBP22.31■■□□□ 1.16
CXXC1P1-202ENST00000489409 OSCARQ8IYS5 282 aa22.27■■□□□ 1.16
CXXC1P1-202ENST00000489409 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
CXXC1P1-202ENST00000489409 FBLN2P98095 1184 aa22.24■■□□□ 1.15
CXXC1P1-202ENST00000489409 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
CXXC1P1-202ENST00000489409 EEA1Q15075 1411 aa22.2■■□□□ 1.14
CXXC1P1-202ENST00000489409 ERICH3Q5RHP9 1530 aa22.19■■□□□ 1.14
CXXC1P1-202ENST00000489409 CUL7Q14999 1698 aa22.19■■□□□ 1.14
CXXC1P1-202ENST00000489409 RUSC2Q8N2Y8 1516 aa22.17■■□□□ 1.14
CXXC1P1-202ENST00000489409 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
CXXC1P1-202ENST00000489409 SNAPC4Q5SXM2 1469 aa22.14■■□□□ 1.13
CXXC1P1-202ENST00000489409 CHD1O14646 1710 aa22.13■■□□□ 1.13
CXXC1P1-202ENST00000489409 ADAMTS12P58397 1594 aa22.1■■□□□ 1.13
CXXC1P1-202ENST00000489409 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
CXXC1P1-202ENST00000489409 MAGI1Q96QZ7 1491 aaPredicted RBP22.09■■□□□ 1.13
CXXC1P1-202ENST00000489409 KIF21BO75037 1637 aa22.02■■□□□ 1.12
CXXC1P1-202ENST00000489409 IGF1RP08069 1367 aa22.02■■□□□ 1.12
CXXC1P1-202ENST00000489409 FAM9AQ8IZU1 332 aaPredicted RBP22.02■■□□□ 1.12
CXXC1P1-202ENST00000489409 SYNJ2O15056 1496 aa21.99■■□□□ 1.11
CXXC1P1-202ENST00000489409 CSRNP3Q8WYN3 585 aa21.98■■□□□ 1.11
CXXC1P1-202ENST00000489409 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
CXXC1P1-202ENST00000489409 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
CXXC1P1-202ENST00000489409 CARMIL1Q5VZK9 1371 aa21.93■■□□□ 1.1
CXXC1P1-202ENST00000489409 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
CXXC1P1-202ENST00000489409 RAPGEF2Q9Y4G8 1499 aa21.92■■□□□ 1.1
CXXC1P1-202ENST00000489409 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
CXXC1P1-202ENST00000489409 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
CXXC1P1-202ENST00000489409 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
CXXC1P1-202ENST00000489409 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms