Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 AC004623.1-201ENST00000624592 2127 ntBASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
HLA-DRB4X5D2U9 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 GOLGA8UP-201ENST00000527159 1755 ntBASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 LINC00567-201ENST00000569854 3409 ntBASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 MANEA-AS1-201ENST00000564541 2268 ntBASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 AL445250.1-201ENST00000641671 2259 ntBASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 PYY2-201ENST00000315776 282 ntBASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 AC005014.1-201ENST00000432006 2976 ntBASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 ERP29P1-201ENST00000442902 706 ntBASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 AC234782.1-201ENST00000451950 919 ntBASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 IGLV3-15-201ENST00000518356 244 ntBASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 NOP2-211ENST00000540228 668 ntTSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 TPM1-223ENST00000560445 485 ntTSL 3 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 PDXDC2P-206ENST00000534700 1315 ntBASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 AC073862.5-201ENST00000624129 2027 ntBASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HLA-DRB4X5D2U9 ODCP-201ENST00000459650 1639 ntBASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
HLA-DRB4X5D2U9 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms