RNA–Protein interactions for RNA: ENST00000587652.5

GCOM1-214, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GCOM1, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-214ENST00000587652 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
GCOM1-214ENST00000587652 CCDC180Q9P1Z9 1646 aa26.45■■□□□ 1.83
GCOM1-214ENST00000587652 ABCC9O60706 1549 aa25.65■■□□□ 1.7
GCOM1-214ENST00000587652 ZCCHC6Q5VYS8 1495 aaKnown RBP25.19■■□□□ 1.62
GCOM1-214ENST00000587652 DCAF8L2P0C7V8 631 aa25.16■■□□□ 1.62
GCOM1-214ENST00000587652 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
GCOM1-214ENST00000587652 NACADO15069 1562 aa24.77■■□□□ 1.56
GCOM1-214ENST00000587652 SHROOM4Q9ULL8 1493 aa24.73■■□□□ 1.55
GCOM1-214ENST00000587652 MYO15BQ96JP2 1530 aa24.7■■□□□ 1.54
GCOM1-214ENST00000587652 RB1CC1Q8TDY2 1594 aa24.7■■□□□ 1.54
GCOM1-214ENST00000587652 SCRIBQ14160 1630 aa24.38■■□□□ 1.49
GCOM1-214ENST00000587652 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
GCOM1-214ENST00000587652 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
GCOM1-214ENST00000587652 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
GCOM1-214ENST00000587652 BICRAQ9NZM4 1560 aa24.06■■□□□ 1.44
GCOM1-214ENST00000587652 CECR2Q9BXF3 1484 aa23.55■■□□□ 1.36
GCOM1-214ENST00000587652 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
GCOM1-214ENST00000587652 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
GCOM1-214ENST00000587652 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
GCOM1-214ENST00000587652 MROH2BQ7Z745 1585 aa23.32■■□□□ 1.32
GCOM1-214ENST00000587652 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
GCOM1-214ENST00000587652 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
GCOM1-214ENST00000587652 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
GCOM1-214ENST00000587652 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
GCOM1-214ENST00000587652 WIZO95785 1651 aa23.1■■□□□ 1.29
GCOM1-214ENST00000587652 ATAD2BQ9ULI0 1458 aa23.03■■□□□ 1.28
GCOM1-214ENST00000587652 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
GCOM1-214ENST00000587652 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
GCOM1-214ENST00000587652 NCAPD3P42695 1498 aa22.89■■□□□ 1.26
GCOM1-214ENST00000587652 BAZ1BQ9UIG0 1483 aaKnown RBP22.86■■□□□ 1.25
GCOM1-214ENST00000587652 HMGXB3Q12766 1538 aa22.79■■□□□ 1.24
GCOM1-214ENST00000587652 TOP2AP11388 1531 aaKnown RBP22.76■■□□□ 1.23
GCOM1-214ENST00000587652 TRIM41Q8WV44 630 aa22.62■■□□□ 1.21
GCOM1-214ENST00000587652 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
GCOM1-214ENST00000587652 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
GCOM1-214ENST00000587652 NESP48681 1621 aa22.38■■□□□ 1.17
GCOM1-214ENST00000587652 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
GCOM1-214ENST00000587652 CFTRP13569 1480 aa22.25■■□□□ 1.15
GCOM1-214ENST00000587652 FAM9AQ8IZU1 332 aaPredicted RBP22.24■■□□□ 1.15
GCOM1-214ENST00000587652 PCGF6Q9BYE7 350 aa22.24■■□□□ 1.15
GCOM1-214ENST00000587652 LAMC3Q9Y6N6 1575 aa22.18■■□□□ 1.14
GCOM1-214ENST00000587652 HRCP23327 699 aa22.17■■□□□ 1.14
GCOM1-214ENST00000587652 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
GCOM1-214ENST00000587652 TRIM26Q12899 539 aaPredicted RBP22.08■■□□□ 1.13
GCOM1-214ENST00000587652 PRDM2Q13029 1718 aa22.08■■□□□ 1.12
GCOM1-214ENST00000587652 KIF21AQ7Z4S6 1674 aa22.06■■□□□ 1.12
GCOM1-214ENST00000587652 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
GCOM1-214ENST00000587652 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
GCOM1-214ENST00000587652 ERCC6Q03468 1493 aa21.98■■□□□ 1.11
GCOM1-214ENST00000587652 EEA1Q15075 1411 aa21.96■■□□□ 1.11
GCOM1-214ENST00000587652 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
GCOM1-214ENST00000587652 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
GCOM1-214ENST00000587652 EHMT2Q96KQ7 1210 aa21.89■■□□□ 1.1
GCOM1-214ENST00000587652 SOGA1O94964 1423 aa21.89■■□□□ 1.09
GCOM1-214ENST00000587652 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
GCOM1-214ENST00000587652 CUX1P39880 1505 aa21.82■■□□□ 1.08
GCOM1-214ENST00000587652 SYNJ1O43426 1573 aa21.82■■□□□ 1.08
GCOM1-214ENST00000587652 THOC2Q8NI27 1593 aaKnown RBP21.81■■□□□ 1.08
GCOM1-214ENST00000587652 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
GCOM1-214ENST00000587652 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
GCOM1-214ENST00000587652 RUSC2Q8N2Y8 1516 aa21.78■■□□□ 1.08
GCOM1-214ENST00000587652 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
GCOM1-214ENST00000587652 TOPBP1Q92547 1522 aa21.76■■□□□ 1.07
GCOM1-214ENST00000587652 DNMBPQ6XZF7 1577 aa21.73■■□□□ 1.07
GCOM1-214ENST00000587652 WDR62O43379 1518 aa21.71■■□□□ 1.07
GCOM1-214ENST00000587652 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
GCOM1-214ENST00000587652 GOLGA3Q08378 1498 aa21.69■■□□□ 1.06
GCOM1-214ENST00000587652 CEP162Q5TB80 1403 aa21.68■■□□□ 1.06
GCOM1-214ENST00000587652 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
GCOM1-214ENST00000587652 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
GCOM1-214ENST00000587652 KIF21BO75037 1637 aa21.64■■□□□ 1.06
GCOM1-214ENST00000587652 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
GCOM1-214ENST00000587652 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
GCOM1-214ENST00000587652 CUX2O14529 1486 aa21.59■■□□□ 1.05
GCOM1-214ENST00000587652 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
GCOM1-214ENST00000587652 ZEB1P37275 1124 aaPredicted RBP21.55■■□□□ 1.04
GCOM1-214ENST00000587652 PPARGC1BQ86YN6 1023 aaKnown RBP21.54■■□□□ 1.04
GCOM1-214ENST00000587652 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
GCOM1-214ENST00000587652 ZNF608Q9ULD9 1512 aaPredicted RBP21.46■■□□□ 1.03
GCOM1-214ENST00000587652 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
GCOM1-214ENST00000587652 IFT140Q96RY7 1462 aa21.43■■□□□ 1.02
GCOM1-214ENST00000587652 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
GCOM1-214ENST00000587652 ABCA10Q8WWZ4 1543 aa21.4■■□□□ 1.02
GCOM1-214ENST00000587652 RAPGEF2Q9Y4G8 1499 aa21.4■■□□□ 1.02
GCOM1-214ENST00000587652 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.01
GCOM1-214ENST00000587652 ERICH3Q5RHP9 1530 aa21.37■■□□□ 1.01
GCOM1-214ENST00000587652 CLIP1P30622 1438 aa21.36■■□□□ 1.01
GCOM1-214ENST00000587652 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
GCOM1-214ENST00000587652 EIF4G3O43432 1585 aaKnown RBP21.32■■□□□ 1
GCOM1-214ENST00000587652 KIF27Q86VH2 1401 aa21.3■■□□□ 1
GCOM1-214ENST00000587652 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
GCOM1-214ENST00000587652 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
GCOM1-214ENST00000587652 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
GCOM1-214ENST00000587652 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
GCOM1-214ENST00000587652 IGF1RP08069 1367 aa21.2■□□□□ 0.99
GCOM1-214ENST00000587652 GRIN2BQ13224 1484 aa21.17■□□□□ 0.98
GCOM1-214ENST00000587652 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
GCOM1-214ENST00000587652 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
GCOM1-214ENST00000587652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.1■□□□□ 0.97
GCOM1-214ENST00000587652 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms