Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 SEPT11-212ENST00000512575 587 ntTSL 44.24□□□□□ -1.732e-6■■■■□ 26.1
MATR3P43243 AADAT-204ENST00000505906 629 ntTSL 33.01□□□□□ -1.932e-6■■■■□ 26.1
MATR3P43243 MAGI2-226ENST00000636424 102 ntTSL 51.57□□□□□ -2.162e-6■■■■□ 26.1
MATR3P43243 HBS1L-204ENST00000367826 2703 ntTSL 2 BASIC11.22□□□□□ -0.611e-6■■■■□ 26.1
MATR3P43243 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.841e-6■■■■□ 26.1
MATR3P43243 HBS1L-216ENST00000533274 2102 ntTSL 27.69□□□□□ -1.181e-6■■■■□ 26.1
MATR3P43243 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.67□□□□□ -1.181e-6■■■■□ 26.1
MATR3P43243 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.56□□□□□ -1.21e-6■■■■□ 26.1
MATR3P43243 HBS1L-209ENST00000526100 1600 ntTSL 25.37□□□□□ -1.551e-6■■■■□ 26.1
MATR3P43243 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.71e-8■■■■□ 26.1
MATR3P43243 RNF19A-212ENST00000523255 793 ntTSL 312.53□□□□□ -0.41e-8■■■■□ 26.1
MATR3P43243 RNF19A-207ENST00000520071 580 ntTSL 26.37□□□□□ -1.391e-8■■■■□ 26.1
MATR3P43243 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.421e-8■■■■□ 26.1
MATR3P43243 RNF19A-214ENST00000523644 274 ntTSL 33.53□□□□□ -1.841e-8■■■■□ 26.1
MATR3P43243 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 09e-7■■■■□ 26
MATR3P43243 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.689e-7■■■■□ 26
MATR3P43243 DNAJC6-207ENST00000494710 1621 ntTSL 527.18■■□□□ 1.941e-6■■■■□ 26
MATR3P43243 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.931e-6■■■■□ 26
MATR3P43243 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.18□□□□□ -1.11e-6■■■■□ 26
MATR3P43243 TRPM4-209ENST00000598502 3695 ntTSL 1 (best)17.57■□□□□ 0.42e-9■■■■□ 26
MATR3P43243 TRPM4-211ENST00000598697 3349 ntTSL 217.03■□□□□ 0.322e-9■■■■□ 26
MATR3P43243 TRPM4-205ENST00000595519 3702 ntTSL 1 (best)16.89■□□□□ 0.292e-9■■■■□ 26
MATR3P43243 TRPM4-207ENST00000596338 3993 ntTSL 216.66■□□□□ 0.262e-9■■■■□ 26
MATR3P43243 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.052e-9■■■■□ 26
MATR3P43243 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC15.09■□□□□ 0.012e-9■■■■□ 26
MATR3P43243 AP1AR-204ENST00000506522 390 ntTSL 225.08■■□□□ 1.613e-7■■■■□ 26
MATR3P43243 AP1AR-205ENST00000510527 1044 ntTSL 1 (best)24.43■■□□□ 1.53e-7■■■■□ 26
MATR3P43243 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.873e-7■■■■□ 26
MATR3P43243 AP1AR-203ENST00000502954 547 ntTSL 318.6■□□□□ 0.573e-7■■■■□ 26
MATR3P43243 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.483e-7■■■■□ 26
MATR3P43243 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.132e-6■■■■□ 26
MATR3P43243 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.992e-6■■■■□ 26
MATR3P43243 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.772e-6■■■■□ 26
MATR3P43243 CNOT6-203ENST00000502447 552 ntTSL 319.47■□□□□ 0.712e-6■■■■□ 26
MATR3P43243 CNOT6-204ENST00000504343 706 ntTSL 35.55□□□□□ -1.522e-6■■■■□ 26
MATR3P43243 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.474e-7■■■■□ 26
MATR3P43243 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.86■□□□□ 0.294e-7■■■■□ 26
MATR3P43243 SERGEF-216ENST00000531299 440 ntTSL 215.37■□□□□ 0.055e-7■■■■□ 26
MATR3P43243 SERGEF-202ENST00000524589 494 ntTSL 214.2□□□□□ -0.145e-7■■■■□ 26
MATR3P43243 EXOC6B-203ENST00000410112 1372 ntTSL 518.05■□□□□ 0.484e-6■■■■□ 25.9
MATR3P43243 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.44■□□□□ 0.384e-6■■■■□ 25.9
MATR3P43243 MAGI2-216ENST00000628997 641 ntTSL 314.87□□□□□ -0.031e-6■■■■□ 25.9
MATR3P43243 LRBA-207ENST00000509835 5578 ntTSL 1 (best)7.68□□□□□ -1.181e-6■■■■□ 25.9
MATR3P43243 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.81■■□□□ 1.083e-9■■■■□ 25.9
MATR3P43243 AL390879.2-202ENST00000431464 646 ntTSL 219.62■□□□□ 0.733e-9■■■■□ 25.9
MATR3P43243 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.473e-6■■■■□ 25.9
MATR3P43243 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.433e-6■■■■□ 25.9
MATR3P43243 CLASP2-209ENST00000468888 6978 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.353e-6■■■■□ 25.9
MATR3P43243 TNS3-205ENST00000434451 560 ntTSL 518.13■□□□□ 0.491e-6■■■■□ 25.9
MATR3P43243 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.061e-6■■■■□ 25.9
MATR3P43243 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.041e-6■■■■□ 25.9
MATR3P43243 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.091e-6■■■■□ 25.9
MATR3P43243 PPARG-212ENST00000455517 428 ntTSL 1 (best)14.2□□□□□ -0.141e-6■■■■□ 25.9
MATR3P43243 PPARG-210ENST00000397029 686 ntTSL 314.1□□□□□ -0.151e-6■■■■□ 25.9
MATR3P43243 PPARG-214ENST00000497594 1600 ntTSL 1 (best)10.85□□□□□ -0.671e-6■■■■□ 25.9
MATR3P43243 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.841e-6■■■■□ 25.9
MATR3P43243 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC9.63□□□□□ -0.871e-6■■■■□ 25.9
MATR3P43243 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.01□□□□□ -1.291e-6■■■■□ 25.9
MATR3P43243 PPARG-211ENST00000438682 560 ntTSL 35.09□□□□□ -1.591e-6■■■■□ 25.9
MATR3P43243 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.081e-7■■■■□ 25.9
MATR3P43243 TAPT1-AS1-202ENST00000573308 1031 ntTSL 229.46■■■□□ 2.312e-7■■■■□ 25.9
MATR3P43243 SLC23A2-204ENST00000468355 1934 ntTSL 1 (best)16.8■□□□□ 0.282e-6■■■■□ 25.9
MATR3P43243 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.822e-6■■■■□ 25.9
MATR3P43243 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.832e-6■■■■□ 25.9
MATR3P43243 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.12e-6■■■■□ 25.9
MATR3P43243 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.882e-6■■■■□ 25.9
MATR3P43243 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.93■□□□□ 0.782e-6■■■■□ 25.9
MATR3P43243 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.79■□□□□ 0.282e-6■■■■□ 25.9
MATR3P43243 HEBP2-203ENST00000453452 512 ntTSL 37.85□□□□□ -1.152e-6■■■■□ 25.9
MATR3P43243 CUL3-214ENST00000541548 535 ntTSL 42.99□□□□□ -1.932e-7■■■■□ 25.9
MATR3P43243 DIAPH1-213ENST00000523100 1180 ntTSL 526.06■■□□□ 1.766e-7■■■■□ 25.9
MATR3P43243 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC12.32□□□□□ -0.441e-6■■■■□ 25.8
MATR3P43243 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC11□□□□□ -0.651e-6■■■■□ 25.8
MATR3P43243 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.661e-6■■■■□ 25.8
MATR3P43243 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC10.62□□□□□ -0.711e-6■■■■□ 25.8
MATR3P43243 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC9.8□□□□□ -0.841e-6■■■■□ 25.8
MATR3P43243 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.184e-7■■■■□ 25.8
MATR3P43243 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.954e-7■■■■□ 25.8
MATR3P43243 ILF3-216ENST00000589600 839 ntTSL 526.88■■□□□ 1.894e-7■■■■□ 25.8
MATR3P43243 TTC19-204ENST00000470399 636 ntTSL 526.61■■□□□ 1.852e-6■■■■□ 25.8
MATR3P43243 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.684e-7■■■■□ 25.8
MATR3P43243 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.584e-7■■■■□ 25.8
MATR3P43243 TTC19-203ENST00000466729 908 ntTSL 524.33■■□□□ 1.492e-6■■■■□ 25.8
MATR3P43243 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC24.18■■□□□ 1.464e-7■■■■□ 25.8
MATR3P43243 MTMR2-214ENST00000495134 784 ntTSL 323.81■■□□□ 1.44e-7■■■■□ 25.8
MATR3P43243 TRAPPC9-215ENST00000524162 591 ntTSL 422.77■■□□□ 1.244e-7■■■■□ 25.8
MATR3P43243 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.1■■□□□ 1.134e-7■■■■□ 25.8
MATR3P43243 MTMR2-210ENST00000481642 544 ntTSL 421.65■■□□□ 1.064e-7■■■■□ 25.8
MATR3P43243 MTMR2-212ENST00000485740 713 ntTSL 521.5■■□□□ 1.034e-7■■■■□ 25.8
MATR3P43243 PDCD6IP-203ENST00000413073 566 ntTSL 420.19■□□□□ 0.825e-9■■■■□ 25.8
MATR3P43243 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.814e-7■■■■□ 25.8
MATR3P43243 PDCD6IP-217ENST00000498147 802 ntTSL 320.03■□□□□ 0.85e-9■■■■□ 25.8
MATR3P43243 TRAPPC9-210ENST00000521667 2021 ntTSL 1 (best)19.96■□□□□ 0.794e-7■■■■□ 25.8
MATR3P43243 ABCG5-203ENST00000409962 2512 ntTSL 219.67■□□□□ 0.744e-7■■■■□ 25.8
MATR3P43243 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.614e-7■■■■□ 25.8
MATR3P43243 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.534e-7■■■■□ 25.8
MATR3P43243 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.454e-7■■■■□ 25.8
MATR3P43243 TRAPPC9-214ENST00000523777 705 ntTSL 317.7■□□□□ 0.424e-7■■■■□ 25.8
MATR3P43243 PDCD6IP-204ENST00000430877 582 ntTSL 317.6■□□□□ 0.415e-9■■■■□ 25.8
MATR3P43243 PDCD6IP-205ENST00000435909 587 ntTSL 517.55■□□□□ 0.45e-9■■■■□ 25.8
Retrieved 100 of 16,209 protein–RNA pairs in 82.9 ms