RNA–Protein interactions for RNA: ENST00000455517.5

PPARG-212, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 1 (best)

Gene PPARG, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-212ENST00000455517 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
PPARG-212ENST00000455517 CCDC180Q9P1Z9 1646 aa26.78■■□□□ 1.88
PPARG-212ENST00000455517 ABCC9O60706 1549 aa26.05■■□□□ 1.76
PPARG-212ENST00000455517 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
PPARG-212ENST00000455517 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
PPARG-212ENST00000455517 NACADO15069 1562 aa25.22■■□□□ 1.63
PPARG-212ENST00000455517 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
PPARG-212ENST00000455517 MYO15BQ96JP2 1530 aa25.18■■□□□ 1.62
PPARG-212ENST00000455517 RB1CC1Q8TDY2 1594 aa25.15■■□□□ 1.62
PPARG-212ENST00000455517 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
PPARG-212ENST00000455517 SCRIBQ14160 1630 aa24.53■■□□□ 1.52
PPARG-212ENST00000455517 SHROOM4Q9ULL8 1493 aa24.39■■□□□ 1.5
PPARG-212ENST00000455517 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
PPARG-212ENST00000455517 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
PPARG-212ENST00000455517 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
PPARG-212ENST00000455517 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
PPARG-212ENST00000455517 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
PPARG-212ENST00000455517 BAZ1AQ9NRL2 1556 aaPredicted RBP23.58■■□□□ 1.37
PPARG-212ENST00000455517 CC2D2AQ9P2K1 1620 aa23.49■■□□□ 1.35
PPARG-212ENST00000455517 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
PPARG-212ENST00000455517 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
PPARG-212ENST00000455517 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
PPARG-212ENST00000455517 ATAD2BQ9ULI0 1458 aa23.38■■□□□ 1.33
PPARG-212ENST00000455517 NCAPD3P42695 1498 aa23.34■■□□□ 1.33
PPARG-212ENST00000455517 SMARCA2P51531 1590 aa23.33■■□□□ 1.33
PPARG-212ENST00000455517 PEG3Q9GZU2 1588 aa23.26■■□□□ 1.31
PPARG-212ENST00000455517 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
PPARG-212ENST00000455517 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
PPARG-212ENST00000455517 WIZO95785 1651 aa23.18■■□□□ 1.3
PPARG-212ENST00000455517 HMGXB3Q12766 1538 aa23.14■■□□□ 1.3
PPARG-212ENST00000455517 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
PPARG-212ENST00000455517 CCDC88BA6NC98 1476 aa22.8■■□□□ 1.24
PPARG-212ENST00000455517 CADPSQ9ULU8 1353 aa22.73■■□□□ 1.23
PPARG-212ENST00000455517 NESP48681 1621 aa22.61■■□□□ 1.21
PPARG-212ENST00000455517 CFTRP13569 1480 aa22.6■■□□□ 1.21
PPARG-212ENST00000455517 LAMC3Q9Y6N6 1575 aa22.58■■□□□ 1.2
PPARG-212ENST00000455517 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
PPARG-212ENST00000455517 ERCC6Q03468 1493 aa22.46■■□□□ 1.19
PPARG-212ENST00000455517 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
PPARG-212ENST00000455517 CEP164Q9UPV0 1460 aa22.32■■□□□ 1.16
PPARG-212ENST00000455517 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
PPARG-212ENST00000455517 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.15
PPARG-212ENST00000455517 PRDM2Q13029 1718 aa22.17■■□□□ 1.14
PPARG-212ENST00000455517 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
PPARG-212ENST00000455517 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
PPARG-212ENST00000455517 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
PPARG-212ENST00000455517 THOC2Q8NI27 1593 aaKnown RBP22.06■■□□□ 1.12
PPARG-212ENST00000455517 WDR62O43379 1518 aa22.06■■□□□ 1.12
PPARG-212ENST00000455517 TOPBP1Q92547 1522 aa22.05■■□□□ 1.12
PPARG-212ENST00000455517 CUX2O14529 1486 aa22.03■■□□□ 1.12
PPARG-212ENST00000455517 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
PPARG-212ENST00000455517 CUX1P39880 1505 aa21.99■■□□□ 1.11
PPARG-212ENST00000455517 TRIM41Q8WV44 630 aa21.96■■□□□ 1.11
PPARG-212ENST00000455517 SOGA1O94964 1423 aa21.91■■□□□ 1.1
PPARG-212ENST00000455517 POLA1P09884 1462 aaPredicted RBP21.89■■□□□ 1.09
PPARG-212ENST00000455517 FGD5Q6ZNL6 1462 aa21.89■■□□□ 1.09
PPARG-212ENST00000455517 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
PPARG-212ENST00000455517 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
PPARG-212ENST00000455517 IFT140Q96RY7 1462 aa21.86■■□□□ 1.09
PPARG-212ENST00000455517 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
PPARG-212ENST00000455517 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.08
PPARG-212ENST00000455517 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
PPARG-212ENST00000455517 TDRD9Q8NDG6 1382 aaKnown RBP21.75■■□□□ 1.07
PPARG-212ENST00000455517 TARBP1Q13395 1621 aaKnown RBP21.7■■□□□ 1.06
PPARG-212ENST00000455517 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.06
PPARG-212ENST00000455517 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.06
PPARG-212ENST00000455517 AQRO60306 1485 aaKnown RBP eCLIP21.69■■□□□ 1.063e-6■■□□□ 13.8
PPARG-212ENST00000455517 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
PPARG-212ENST00000455517 GAPVD1Q14C86 1478 aa21.61■■□□□ 1.05
PPARG-212ENST00000455517 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
PPARG-212ENST00000455517 GRIN2BQ13224 1484 aa21.56■■□□□ 1.04
PPARG-212ENST00000455517 EIF4G3O43432 1585 aaKnown RBP21.52■■□□□ 1.04
PPARG-212ENST00000455517 IGF1RP08069 1367 aa21.51■■□□□ 1.03
PPARG-212ENST00000455517 FBLN2P98095 1184 aa21.5■■□□□ 1.03
PPARG-212ENST00000455517 CHMP7Q8WUX9 453 aaPredicted RBP21.49■■□□□ 1.03
PPARG-212ENST00000455517 FAM9AQ8IZU1 332 aaPredicted RBP21.48■■□□□ 1.03
PPARG-212ENST00000455517 RUSC2Q8N2Y8 1516 aa21.47■■□□□ 1.03
PPARG-212ENST00000455517 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
PPARG-212ENST00000455517 ABCA5Q8WWZ7 1642 aa21.46■■□□□ 1.03
PPARG-212ENST00000455517 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
PPARG-212ENST00000455517 EEA1Q15075 1411 aa21.43■■□□□ 1.02
PPARG-212ENST00000455517 SNAPC4Q5SXM2 1469 aa21.43■■□□□ 1.02
PPARG-212ENST00000455517 MAGI1Q96QZ7 1491 aaPredicted RBP21.42■■□□□ 1.02
PPARG-212ENST00000455517 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
PPARG-212ENST00000455517 FHAD1B1AJZ9 1412 aa21.39■■□□□ 1.02
PPARG-212ENST00000455517 CARMIL1Q5VZK9 1371 aa21.39■■□□□ 1.02
PPARG-212ENST00000455517 SYNJ2O15056 1496 aa21.35■■□□□ 1.01
PPARG-212ENST00000455517 PBRM1Q86U86 1689 aa21.32■■□□□ 1
PPARG-212ENST00000455517 RAPGEF2Q9Y4G8 1499 aa21.25■□□□□ 0.99
PPARG-212ENST00000455517 ADAMTS12P58397 1594 aa21.24■□□□□ 0.99
PPARG-212ENST00000455517 GRIN2AQ12879 1464 aa21.24■□□□□ 0.99
PPARG-212ENST00000455517 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
PPARG-212ENST00000455517 CUL7Q14999 1698 aa21.23■□□□□ 0.99
PPARG-212ENST00000455517 EHMT2Q96KQ7 1210 aa21.16■□□□□ 0.98
PPARG-212ENST00000455517 UBTFP17480 764 aaKnown RBP21.14■□□□□ 0.97
PPARG-212ENST00000455517 NUP160Q12769 1436 aa21.13■□□□□ 0.97
PPARG-212ENST00000455517 CHD1O14646 1710 aa21.12■□□□□ 0.97
PPARG-212ENST00000455517 JPH4Q96JJ6 628 aa21.1■□□□□ 0.97
PPARG-212ENST00000455517 DNAJC5Q9H3Z4 198 aa21.1■□□□□ 0.97
PPARG-212ENST00000455517 KIAA0586Q9BVV6 1533 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms