RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
CUL3-214ENST00000541548 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
CUL3-214ENST00000541548 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
CUL3-214ENST00000541548 SENP3Q9H4L4 574 aaPredicted RBP17.78■□□□□ 0.44
CUL3-214ENST00000541548 FOXD1Q16676 465 aa16.64■□□□□ 0.25
CUL3-214ENST00000541548 PLPPR3Q6T4P5 718 aa16.4■□□□□ 0.22
CUL3-214ENST00000541548 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
CUL3-214ENST00000541548 ADRA2BP18089 450 aa15.84■□□□□ 0.13
CUL3-214ENST00000541548 POTEDQ86YR6 584 aa15.73■□□□□ 0.11
CUL3-214ENST00000541548 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
CUL3-214ENST00000541548 MSH5O43196 834 aa15.26■□□□□ 0.03
CUL3-214ENST00000541548 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
CUL3-214ENST00000541548 MAPK8IP2Q13387 824 aaPredicted RBP14.44□□□□□ -0.1
CUL3-214ENST00000541548 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
CUL3-214ENST00000541548 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
CUL3-214ENST00000541548 CNKSR2Q8WXI2 1034 aa14.07□□□□□ -0.16
CUL3-214ENST00000541548 KCNA4P22459 653 aa14.03□□□□□ -0.16
CUL3-214ENST00000541548 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
CUL3-214ENST00000541548 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
CUL3-214ENST00000541548 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
CUL3-214ENST00000541548 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
CUL3-214ENST00000541548 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
CUL3-214ENST00000541548 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
CUL3-214ENST00000541548 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
CUL3-214ENST00000541548 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
CUL3-214ENST00000541548 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
CUL3-214ENST00000541548 CACNB1Q02641 598 aaPredicted RBP13.08□□□□□ -0.32
CUL3-214ENST00000541548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.08□□□□□ -0.32
CUL3-214ENST00000541548 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
CUL3-214ENST00000541548 ZBTB22O15209 634 aa13.01□□□□□ -0.33
CUL3-214ENST00000541548 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
CUL3-214ENST00000541548 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
CUL3-214ENST00000541548 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
CUL3-214ENST00000541548 CSRNP3Q8WYN3 585 aa12.73□□□□□ -0.37
CUL3-214ENST00000541548 SPINK5Q9NQ38 1064 aaPredicted RBP12.7□□□□□ -0.38
CUL3-214ENST00000541548 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
CUL3-214ENST00000541548 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
CUL3-214ENST00000541548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.6□□□□□ -0.39
CUL3-214ENST00000541548 HNRNPUL2Q1KMD3 747 aaKnown RBP12.6□□□□□ -0.39
CUL3-214ENST00000541548 ATF5Q9Y2D1 282 aaPredicted RBP12.58□□□□□ -0.4
CUL3-214ENST00000541548 CAPN15O75808 1086 aa12.5□□□□□ -0.41
CUL3-214ENST00000541548 DSG3P32926 999 aa12.47□□□□□ -0.41
CUL3-214ENST00000541548 APLP2Q06481 763 aa12.45□□□□□ -0.42
CUL3-214ENST00000541548 ATXN8OSP0DMR3 200 aa12.43□□□□□ -0.42
CUL3-214ENST00000541548 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
CUL3-214ENST00000541548 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
CUL3-214ENST00000541548 ABCB7O75027 752 aa12.33□□□□□ -0.44
CUL3-214ENST00000541548 POLA2Q14181 598 aa12.23□□□□□ -0.45
CUL3-214ENST00000541548 POTEHQ6S545 545 aa12.14□□□□□ -0.47
CUL3-214ENST00000541548 MKRN4PQ13434 485 aaPredicted RBP12.04□□□□□ -0.48
CUL3-214ENST00000541548 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
CUL3-214ENST00000541548 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
CUL3-214ENST00000541548 FBLN2P98095 1184 aa11.81□□□□□ -0.52
CUL3-214ENST00000541548 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
CUL3-214ENST00000541548 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
CUL3-214ENST00000541548 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
CUL3-214ENST00000541548 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
CUL3-214ENST00000541548 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
CUL3-214ENST00000541548 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
CUL3-214ENST00000541548 ZNF692Q9BU19 519 aaPredicted RBP11.56□□□□□ -0.56
CUL3-214ENST00000541548 REM2Q8IYK8 340 aaPredicted RBP11.55□□□□□ -0.56
CUL3-214ENST00000541548 SPDYE4A6NLX3 237 aa11.52□□□□□ -0.57
CUL3-214ENST00000541548 PROM2Q8N271 834 aa11.5□□□□□ -0.57
CUL3-214ENST00000541548 PITPNM1O00562 1244 aa11.46□□□□□ -0.57
CUL3-214ENST00000541548 PABPN1Q86U42 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
CUL3-214ENST00000541548 CHRDL2Q6WN34 429 aa11.4□□□□□ -0.58
CUL3-214ENST00000541548 FKBP8Q14318 412 aa11.39□□□□□ -0.59
CUL3-214ENST00000541548 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
CUL3-214ENST00000541548 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.62e-7■■□□□ 13.2
CUL3-214ENST00000541548 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
CUL3-214ENST00000541548 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
CUL3-214ENST00000541548 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
CUL3-214ENST00000541548 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
CUL3-214ENST00000541548 CREBZFQ9NS37 354 aa11.11□□□□□ -0.63
CUL3-214ENST00000541548 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
CUL3-214ENST00000541548 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
CUL3-214ENST00000541548 MNX1P50219 401 aaPredicted RBP11.06□□□□□ -0.64
CUL3-214ENST00000541548 SP7Q8TDD2 431 aaPredicted RBP11.02□□□□□ -0.65
CUL3-214ENST00000541548 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
CUL3-214ENST00000541548 FBXO3Q9UK99 471 aa10.94□□□□□ -0.66
CUL3-214ENST00000541548 VASPP50552 380 aaPredicted RBP10.92□□□□□ -0.66
CUL3-214ENST00000541548 EVX2Q03828 476 aa10.92□□□□□ -0.66
CUL3-214ENST00000541548 C19orf67A6NJJ6 358 aa10.9□□□□□ -0.66
CUL3-214ENST00000541548 MIER1Q8N108 512 aa10.86□□□□□ -0.67
CUL3-214ENST00000541548 IFNLR1Q8IU57 520 aaPredicted RBP10.81□□□□□ -0.68
CUL3-214ENST00000541548 PLCD3Q8N3E9 789 aa10.81□□□□□ -0.68
CUL3-214ENST00000541548 HAX1O00165 279 aa10.8□□□□□ -0.68
CUL3-214ENST00000541548 NUBP1P53384 320 aa10.78□□□□□ -0.68
CUL3-214ENST00000541548 CD44P16070 742 aaKnown RBP10.76□□□□□ -0.69
CUL3-214ENST00000541548 RASEFQ8IZ41 740 aa10.76□□□□□ -0.69
CUL3-214ENST00000541548 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
CUL3-214ENST00000541548 PLEKHG5O94827 1062 aa10.69□□□□□ -0.7
CUL3-214ENST00000541548 ZNF579Q8NAF0 562 aaKnown RBP10.68□□□□□ -0.7
CUL3-214ENST00000541548 ZBTB47Q9UFB7 747 aaPredicted RBP10.68□□□□□ -0.7
CUL3-214ENST00000541548 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
CUL3-214ENST00000541548 ZRANB1Q9UGI0 708 aa10.65□□□□□ -0.7
CUL3-214ENST00000541548 PHF12Q96QT6 1004 aa10.62□□□□□ -0.71
CUL3-214ENST00000541548 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
CUL3-214ENST00000541548 GABBR2O75899 941 aa10.6□□□□□ -0.71
CUL3-214ENST00000541548 KLHL34Q8N239 644 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms