RNA–Protein interactions for RNA: ENST00000466729.5

TTC19-203, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 5

Gene TTC19, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-203ENST00000466729 NISCHQ9Y2I1 1504 aa53.57■■■■■ 6.17
TTC19-203ENST00000466729 CCDC180Q9P1Z9 1646 aa47.45■■■■■ 5.19
TTC19-203ENST00000466729 ABCC9O60706 1549 aa46.58■■■■■ 5.05
TTC19-203ENST00000466729 ZCCHC6Q5VYS8 1495 aaKnown RBP44.68■■■■■ 4.74
TTC19-203ENST00000466729 DCAF8L2P0C7V8 631 aa44.64■■■■■ 4.74
TTC19-203ENST00000466729 NACADO15069 1562 aa44.56■■■■■ 4.72
TTC19-203ENST00000466729 RB1CC1Q8TDY2 1594 aa44.54■■■■■ 4.72
TTC19-203ENST00000466729 MYO15BQ96JP2 1530 aa44.4■■■■■ 4.7
TTC19-203ENST00000466729 DCAF1Q9Y4B6 1507 aa44.33■■■■■ 4.69
TTC19-203ENST00000466729 UNC13AQ9UPW8 1703 aa43.51■■■■■ 4.56
TTC19-203ENST00000466729 DNAJC5BQ9UF47 199 aa43.51■■■■■ 4.56
TTC19-203ENST00000466729 SCRIBQ14160 1630 aa43.34■■■■■ 4.53
TTC19-203ENST00000466729 PABPN1Q86U42 306 aaKnown RBP eCLIP43.33■■■■■ 4.53
TTC19-203ENST00000466729 BICRAQ9NZM4 1560 aa43.21■■■■■ 4.51
TTC19-203ENST00000466729 SHROOM4Q9ULL8 1493 aa42.74■■■■■ 4.43
TTC19-203ENST00000466729 CC2D2AQ9P2K1 1620 aa42.1■■■■■ 4.33
TTC19-203ENST00000466729 EIF4G1Q04637 1599 aaKnown RBP42.03■■■■■ 4.32
TTC19-203ENST00000466729 CECR2Q9BXF3 1484 aa41.92■■■■■ 4.3
TTC19-203ENST00000466729 SMARCA4P51532 1647 aa41.49■■■■■ 4.23
TTC19-203ENST00000466729 BAZ1AQ9NRL2 1556 aaPredicted RBP41.48■■■■■ 4.23
TTC19-203ENST00000466729 MROH2BQ7Z745 1585 aa41.29■■■■■ 4.2
TTC19-203ENST00000466729 ATAD2BQ9ULI0 1458 aa41.21■■■■■ 4.19
TTC19-203ENST00000466729 SMARCA2P51531 1590 aa41.15■■■■■ 4.18
TTC19-203ENST00000466729 NCAPD3P42695 1498 aa41.15■■■■■ 4.18
TTC19-203ENST00000466729 PEG3Q9GZU2 1588 aa41.08■■■■■ 4.17
TTC19-203ENST00000466729 HMGXB3Q12766 1538 aa40.95■■■■■ 4.15
TTC19-203ENST00000466729 RSF1Q96T23 1441 aaPredicted RBP40.93■■■■■ 4.14
TTC19-203ENST00000466729 BAZ1BQ9UIG0 1483 aaKnown RBP40.87■■■■■ 4.13
TTC19-203ENST00000466729 WIZO95785 1651 aa40.85■■■■■ 4.13
TTC19-203ENST00000466729 TOP2AP11388 1531 aaKnown RBP40.43■■■■■ 4.06
TTC19-203ENST00000466729 ERCC6Q03468 1493 aa40.21■■■■■ 4.03
TTC19-203ENST00000466729 SUPT5HO00267 1087 aaKnown RBP40.12■■■■■ 4.01
TTC19-203ENST00000466729 CUX2O14529 1486 aa40.07■■■■■ 4.01
TTC19-203ENST00000466729 NESP48681 1621 aa40.07■■■■■ 4.01
TTC19-203ENST00000466729 LAMC3Q9Y6N6 1575 aa39.98■■■■□ 3.99
TTC19-203ENST00000466729 CCDC88BA6NC98 1476 aa39.98■■■■□ 3.99
TTC19-203ENST00000466729 CADPSQ9ULU8 1353 aa39.97■■■■□ 3.99
TTC19-203ENST00000466729 DNAJC5Q9H3Z4 198 aa39.85■■■■□ 3.97
TTC19-203ENST00000466729 CFTRP13569 1480 aa39.78■■■■□ 3.96
TTC19-203ENST00000466729 PDS5BQ9NTI5 1447 aa39.72■■■■□ 3.95
TTC19-203ENST00000466729 THOC2Q8NI27 1593 aaKnown RBP39.67■■■■□ 3.94
TTC19-203ENST00000466729 KIF21AQ7Z4S6 1674 aa39.63■■■■□ 3.93
TTC19-203ENST00000466729 FANCD2Q9BXW9 1451 aa39.49■■■■□ 3.91
TTC19-203ENST00000466729 PRDM2Q13029 1718 aa39.44■■■■□ 3.9
TTC19-203ENST00000466729 CEP164Q9UPV0 1460 aa39.41■■■■□ 3.9
TTC19-203ENST00000466729 MRC2Q9UBG0 1479 aa39.3■■■■□ 3.88
TTC19-203ENST00000466729 WDR62O43379 1518 aa39.15■■■■□ 3.86
TTC19-203ENST00000466729 URB2Q14146 1524 aaKnown RBP39.09■■■■□ 3.85
TTC19-203ENST00000466729 TOPBP1Q92547 1522 aa38.9■■■■□ 3.82
TTC19-203ENST00000466729 ABCC8Q09428 1581 aa38.89■■■■□ 3.82
TTC19-203ENST00000466729 DNMBPQ6XZF7 1577 aa38.87■■■■□ 3.81
TTC19-203ENST00000466729 CUX1P39880 1505 aa38.72■■■■□ 3.79
TTC19-203ENST00000466729 POLA1P09884 1462 aaPredicted RBP38.59■■■■□ 3.77
TTC19-203ENST00000466729 IFT140Q96RY7 1462 aa38.58■■■■□ 3.77
TTC19-203ENST00000466729 WRNQ14191 1432 aaPredicted RBP eCLIP38.57■■■■□ 3.77
TTC19-203ENST00000466729 FGD5Q6ZNL6 1462 aa38.54■■■■□ 3.76
TTC19-203ENST00000466729 SYNJ1O43426 1573 aa38.47■■■■□ 3.75
TTC19-203ENST00000466729 TOP2BQ02880 1626 aa38.45■■■■□ 3.75
TTC19-203ENST00000466729 TARBP1Q13395 1621 aaKnown RBP38.45■■■■□ 3.75
TTC19-203ENST00000466729 BIVM-ERCC5R4GMW8 1640 aa38.44■■■■□ 3.74
TTC19-203ENST00000466729 SOGA1O94964 1423 aa38.44■■■■□ 3.74
TTC19-203ENST00000466729 RAD54L2Q9Y4B4 1467 aa38.43■■■■□ 3.74
TTC19-203ENST00000466729 ZNF608Q9ULD9 1512 aaPredicted RBP38.39■■■■□ 3.74
TTC19-203ENST00000466729 EIF4G3O43432 1585 aaKnown RBP38.23■■■■□ 3.71
TTC19-203ENST00000466729 AQRO60306 1485 aaKnown RBP eCLIP38.22■■■■□ 3.719e-7■■■■□ 21.9
TTC19-203ENST00000466729 TRIM41Q8WV44 630 aa38.22■■■■□ 3.71
TTC19-203ENST00000466729 TDRD9Q8NDG6 1382 aaKnown RBP38.19■■■■□ 3.7
TTC19-203ENST00000466729 OSCARQ8IYS5 282 aa38.19■■■■□ 3.7
TTC19-203ENST00000466729 WDR97A6NE52 1622 aa38.19■■■■□ 3.7
TTC19-203ENST00000466729 ABCA10Q8WWZ4 1543 aa38.18■■■■□ 3.7
TTC19-203ENST00000466729 ABCA5Q8WWZ7 1642 aa37.99■■■■□ 3.67
TTC19-203ENST00000466729 GAPVD1Q14C86 1478 aa37.99■■■■□ 3.67
TTC19-203ENST00000466729 GRIN2BQ13224 1484 aa37.95■■■■□ 3.67
TTC19-203ENST00000466729 PBRM1Q86U86 1689 aa37.86■■■■□ 3.65
TTC19-203ENST00000466729 SNAPC4Q5SXM2 1469 aa37.85■■■■□ 3.65
TTC19-203ENST00000466729 RIMBP3CA6NJZ7 1639 aa37.82■■■■□ 3.64
TTC19-203ENST00000466729 RIMBP3BA6NNM3 1639 aa37.82■■■■□ 3.64
TTC19-203ENST00000466729 RIMBP3Q9UFD9 1639 aa37.82■■■■□ 3.64
TTC19-203ENST00000466729 MAGI1Q96QZ7 1491 aaPredicted RBP37.81■■■■□ 3.64
TTC19-203ENST00000466729 CHD1O14646 1710 aa37.8■■■■□ 3.64
TTC19-203ENST00000466729 KIF27Q86VH2 1401 aa37.74■■■■□ 3.63
TTC19-203ENST00000466729 ERICH3Q5RHP9 1530 aa37.71■■■■□ 3.63
TTC19-203ENST00000466729 FBLN2P98095 1184 aa37.69■■■■□ 3.62
TTC19-203ENST00000466729 ARHGEF11O15085 1522 aa37.67■■■■□ 3.62
TTC19-203ENST00000466729 SYNJ2O15056 1496 aa37.66■■■■□ 3.62
TTC19-203ENST00000466729 CHIC1Q5VXU3 224 aa37.63■■■■□ 3.61
TTC19-203ENST00000466729 CHMP7Q8WUX9 453 aaPredicted RBP37.63■■■■□ 3.61
TTC19-203ENST00000466729 ADAMTS12P58397 1594 aa37.6■■■■□ 3.61
TTC19-203ENST00000466729 IGF1RP08069 1367 aa37.58■■■■□ 3.61
TTC19-203ENST00000466729 FHAD1B1AJZ9 1412 aa37.56■■■■□ 3.6
TTC19-203ENST00000466729 RUSC2Q8N2Y8 1516 aa37.52■■■■□ 3.6
TTC19-203ENST00000466729 GRIN2AQ12879 1464 aa37.46■■■■□ 3.59
TTC19-203ENST00000466729 CUL7Q14999 1698 aa37.41■■■■□ 3.58
TTC19-203ENST00000466729 CARMIL1Q5VZK9 1371 aa37.35■■■■□ 3.57
TTC19-203ENST00000466729 CYB5RLQ6IPT4 315 aa37.32■■■■□ 3.56
TTC19-203ENST00000466729 ARAP1Q96P48 1450 aa37.32■■■■□ 3.56
TTC19-203ENST00000466729 CLASP1Q7Z460 1538 aa37.31■■■■□ 3.56
TTC19-203ENST00000466729 NUP160Q12769 1436 aa37.29■■■■□ 3.56
TTC19-203ENST00000466729 CEP170Q5SW79 1584 aa37.26■■■■□ 3.56
TTC19-203ENST00000466729 EEA1Q15075 1411 aa37.2■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms