RNA–Protein interactions for RNA: ENST00000497594.5

PPARG-214, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 1 (best)

Gene PPARG, Length 1,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-214ENST00000497594 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
PPARG-214ENST00000497594 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.76
PPARG-214ENST00000497594 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
PPARG-214ENST00000497594 DCAF8L2P0C7V8 631 aa18.8■□□□□ 0.6
PPARG-214ENST00000497594 ABCC9O60706 1549 aa18.79■□□□□ 0.6
PPARG-214ENST00000497594 DCAF1Q9Y4B6 1507 aa18.78■□□□□ 0.6
PPARG-214ENST00000497594 MYO15BQ96JP2 1530 aa18.56■□□□□ 0.56
PPARG-214ENST00000497594 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
PPARG-214ENST00000497594 NACADO15069 1562 aa18.46■□□□□ 0.55
PPARG-214ENST00000497594 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
PPARG-214ENST00000497594 SCRIBQ14160 1630 aa18.26■□□□□ 0.51
PPARG-214ENST00000497594 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
PPARG-214ENST00000497594 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
PPARG-214ENST00000497594 BICRAQ9NZM4 1560 aa17.81■□□□□ 0.44
PPARG-214ENST00000497594 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
PPARG-214ENST00000497594 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
PPARG-214ENST00000497594 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
PPARG-214ENST00000497594 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
PPARG-214ENST00000497594 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
PPARG-214ENST00000497594 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
PPARG-214ENST00000497594 WIZO95785 1651 aa17.46■□□□□ 0.39
PPARG-214ENST00000497594 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
PPARG-214ENST00000497594 EIF4G1Q04637 1599 aaKnown RBP17.24■□□□□ 0.35
PPARG-214ENST00000497594 TOP2AP11388 1531 aaKnown RBP17.24■□□□□ 0.35
PPARG-214ENST00000497594 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
PPARG-214ENST00000497594 SMARCA2P51531 1590 aa17.17■□□□□ 0.34
PPARG-214ENST00000497594 BAZ1BQ9UIG0 1483 aaKnown RBP17.09■□□□□ 0.33
PPARG-214ENST00000497594 CCDC88BA6NC98 1476 aa17.08■□□□□ 0.33
PPARG-214ENST00000497594 CHIC1Q5VXU3 224 aa17.07■□□□□ 0.32
PPARG-214ENST00000497594 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
PPARG-214ENST00000497594 HMGXB3Q12766 1538 aa17.02■□□□□ 0.31
PPARG-214ENST00000497594 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
PPARG-214ENST00000497594 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
PPARG-214ENST00000497594 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
PPARG-214ENST00000497594 CFTRP13569 1480 aa16.66■□□□□ 0.26
PPARG-214ENST00000497594 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
PPARG-214ENST00000497594 CADPSQ9ULU8 1353 aa16.61■□□□□ 0.25
PPARG-214ENST00000497594 PRDM2Q13029 1718 aa16.6■□□□□ 0.25
PPARG-214ENST00000497594 WRNQ14191 1432 aaPredicted RBP eCLIP16.58■□□□□ 0.25
PPARG-214ENST00000497594 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
PPARG-214ENST00000497594 NESP48681 1621 aa16.52■□□□□ 0.23
PPARG-214ENST00000497594 FAM9AQ8IZU1 332 aaPredicted RBP16.48■□□□□ 0.23
PPARG-214ENST00000497594 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
PPARG-214ENST00000497594 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
PPARG-214ENST00000497594 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.23
PPARG-214ENST00000497594 LOC105371045A0A1W2PR82 267 aa16.45■□□□□ 0.22
PPARG-214ENST00000497594 CUX1P39880 1505 aa16.44■□□□□ 0.22
PPARG-214ENST00000497594 FANCD2Q9BXW9 1451 aa16.43■□□□□ 0.22
PPARG-214ENST00000497594 SOGA1O94964 1423 aa16.41■□□□□ 0.22
PPARG-214ENST00000497594 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
PPARG-214ENST00000497594 PDS5BQ9NTI5 1447 aa16.33■□□□□ 0.2
PPARG-214ENST00000497594 CEP164Q9UPV0 1460 aa16.32■□□□□ 0.2
PPARG-214ENST00000497594 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
PPARG-214ENST00000497594 EEA1Q15075 1411 aa16.31■□□□□ 0.2
PPARG-214ENST00000497594 DNMBPQ6XZF7 1577 aa16.29■□□□□ 0.2
PPARG-214ENST00000497594 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.19
PPARG-214ENST00000497594 TOPBP1Q92547 1522 aa16.26■□□□□ 0.19
PPARG-214ENST00000497594 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
PPARG-214ENST00000497594 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
PPARG-214ENST00000497594 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
PPARG-214ENST00000497594 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
PPARG-214ENST00000497594 KIF27Q86VH2 1401 aa16.15■□□□□ 0.18
PPARG-214ENST00000497594 RAD54L2Q9Y4B4 1467 aa16.15■□□□□ 0.18
PPARG-214ENST00000497594 CUX2O14529 1486 aa16.14■□□□□ 0.17
PPARG-214ENST00000497594 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
PPARG-214ENST00000497594 KIF21BO75037 1637 aa16.13■□□□□ 0.17
PPARG-214ENST00000497594 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
PPARG-214ENST00000497594 ABCA10Q8WWZ4 1543 aa16.1■□□□□ 0.17
PPARG-214ENST00000497594 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
PPARG-214ENST00000497594 WDR97A6NE52 1622 aa16.08■□□□□ 0.16
PPARG-214ENST00000497594 TNIKQ9UKE5 1360 aa16.06■□□□□ 0.16
PPARG-214ENST00000497594 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
PPARG-214ENST00000497594 RAPGEF2Q9Y4G8 1499 aa16.05■□□□□ 0.16
PPARG-214ENST00000497594 WDR62O43379 1518 aa16.05■□□□□ 0.16
PPARG-214ENST00000497594 IGF1RP08069 1367 aa16.05■□□□□ 0.16
PPARG-214ENST00000497594 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
PPARG-214ENST00000497594 UBTFP17480 764 aaKnown RBP16.04■□□□□ 0.16
PPARG-214ENST00000497594 TARBP1Q13395 1621 aaKnown RBP16.04■□□□□ 0.16
PPARG-214ENST00000497594 ERICH3Q5RHP9 1530 aa16.01■□□□□ 0.15
PPARG-214ENST00000497594 AEBP2Q6ZN18 517 aaPredicted RBP16.01■□□□□ 0.15
PPARG-214ENST00000497594 ABCA5Q8WWZ7 1642 aa15.99■□□□□ 0.15
PPARG-214ENST00000497594 TDRD9Q8NDG6 1382 aaKnown RBP15.98■□□□□ 0.15
PPARG-214ENST00000497594 CEP162Q5TB80 1403 aa15.97■□□□□ 0.15
PPARG-214ENST00000497594 CARMIL1Q5VZK9 1371 aa15.96■□□□□ 0.14
PPARG-214ENST00000497594 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
PPARG-214ENST00000497594 IFT140Q96RY7 1462 aa15.93■□□□□ 0.14
PPARG-214ENST00000497594 CUL7Q14999 1698 aa15.9■□□□□ 0.14
PPARG-214ENST00000497594 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.133e-6■■□□□ 13.8
PPARG-214ENST00000497594 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
PPARG-214ENST00000497594 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
PPARG-214ENST00000497594 CLIP1P30622 1438 aa15.85■□□□□ 0.13
PPARG-214ENST00000497594 RANGAP1P46060 587 aaPredicted RBP15.82■□□□□ 0.12
PPARG-214ENST00000497594 GRIN2BQ13224 1484 aa15.81■□□□□ 0.12
PPARG-214ENST00000497594 EIF4G3O43432 1585 aaKnown RBP15.81■□□□□ 0.12
PPARG-214ENST00000497594 ADAMTS12P58397 1594 aa15.77■□□□□ 0.12
PPARG-214ENST00000497594 FHAD1B1AJZ9 1412 aa15.76■□□□□ 0.11
PPARG-214ENST00000497594 CTTNBP2Q8WZ74 1663 aa15.75■□□□□ 0.11
PPARG-214ENST00000497594 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
PPARG-214ENST00000497594 ARAP1Q96P48 1450 aa15.72■□□□□ 0.11
PPARG-214ENST00000497594 ARHGAP35Q9NRY4 1499 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms