RNA–Protein interactions for RNA: ENST00000397015.6

PPARG-207, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 1,722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-207ENST00000397015 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
PPARG-207ENST00000397015 CCDC180Q9P1Z9 1646 aa17.71■□□□□ 0.43
PPARG-207ENST00000397015 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
PPARG-207ENST00000397015 DCAF8L2P0C7V8 631 aa16.87■□□□□ 0.29
PPARG-207ENST00000397015 DCAF1Q9Y4B6 1507 aa16.85■□□□□ 0.29
PPARG-207ENST00000397015 ABCC9O60706 1549 aa16.78■□□□□ 0.28
PPARG-207ENST00000397015 MYO15BQ96JP2 1530 aa16.68■□□□□ 0.26
PPARG-207ENST00000397015 NACADO15069 1562 aa16.56■□□□□ 0.24
PPARG-207ENST00000397015 SHROOM4Q9ULL8 1493 aa16.53■□□□□ 0.24
PPARG-207ENST00000397015 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
PPARG-207ENST00000397015 SCRIBQ14160 1630 aa16.24■□□□□ 0.19
PPARG-207ENST00000397015 SUPT5HO00267 1087 aaKnown RBP15.97■□□□□ 0.15
PPARG-207ENST00000397015 UNC13AQ9UPW8 1703 aa15.93■□□□□ 0.14
PPARG-207ENST00000397015 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
PPARG-207ENST00000397015 BICRAQ9NZM4 1560 aa15.84■□□□□ 0.13
PPARG-207ENST00000397015 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.12
PPARG-207ENST00000397015 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.11
PPARG-207ENST00000397015 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.11
PPARG-207ENST00000397015 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
PPARG-207ENST00000397015 SMARCA4P51532 1647 aa15.59■□□□□ 0.09
PPARG-207ENST00000397015 WIZO95785 1651 aa15.51■□□□□ 0.07
PPARG-207ENST00000397015 PEG3Q9GZU2 1588 aa15.44■□□□□ 0.06
PPARG-207ENST00000397015 SMARCA2P51531 1590 aa15.4■□□□□ 0.06
PPARG-207ENST00000397015 TOP2AP11388 1531 aaKnown RBP15.4■□□□□ 0.06
PPARG-207ENST00000397015 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
PPARG-207ENST00000397015 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
PPARG-207ENST00000397015 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
PPARG-207ENST00000397015 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
PPARG-207ENST00000397015 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
PPARG-207ENST00000397015 CCDC88BA6NC98 1476 aa15.26■□□□□ 0.03
PPARG-207ENST00000397015 HMGXB3Q12766 1538 aa15.23■□□□□ 0.03
PPARG-207ENST00000397015 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
PPARG-207ENST00000397015 TRIM41Q8WV44 630 aa15.06■□□□□ 0
PPARG-207ENST00000397015 CFTRP13569 1480 aa14.94□□□□□ -0.02
PPARG-207ENST00000397015 CADPSQ9ULU8 1353 aa14.92□□□□□ -0.02
PPARG-207ENST00000397015 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
PPARG-207ENST00000397015 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
PPARG-207ENST00000397015 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
PPARG-207ENST00000397015 LAMC3Q9Y6N6 1575 aa14.76□□□□□ -0.05
PPARG-207ENST00000397015 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
PPARG-207ENST00000397015 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
PPARG-207ENST00000397015 FANCD2Q9BXW9 1451 aa14.71□□□□□ -0.05
PPARG-207ENST00000397015 SYNJ1O43426 1573 aa14.71□□□□□ -0.05
PPARG-207ENST00000397015 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
PPARG-207ENST00000397015 PDS5BQ9NTI5 1447 aa14.7□□□□□ -0.06
PPARG-207ENST00000397015 EEA1Q15075 1411 aa14.69□□□□□ -0.06
PPARG-207ENST00000397015 NESP48681 1621 aa14.69□□□□□ -0.06
PPARG-207ENST00000397015 LOC105371045A0A1W2PR82 267 aa14.67□□□□□ -0.06
PPARG-207ENST00000397015 BIVM-ERCC5R4GMW8 1640 aa14.66□□□□□ -0.06
PPARG-207ENST00000397015 CUX1P39880 1505 aa14.65□□□□□ -0.06
PPARG-207ENST00000397015 SOGA1O94964 1423 aa14.64□□□□□ -0.07
PPARG-207ENST00000397015 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
PPARG-207ENST00000397015 CEP164Q9UPV0 1460 aa14.62□□□□□ -0.07
PPARG-207ENST00000397015 DNMBPQ6XZF7 1577 aa14.56□□□□□ -0.08
PPARG-207ENST00000397015 RUSC2Q8N2Y8 1516 aa14.55□□□□□ -0.08
PPARG-207ENST00000397015 TOPBP1Q92547 1522 aa14.53□□□□□ -0.08
PPARG-207ENST00000397015 KIF27Q86VH2 1401 aa14.52□□□□□ -0.08
PPARG-207ENST00000397015 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.09
PPARG-207ENST00000397015 URB2Q14146 1524 aaKnown RBP14.49□□□□□ -0.09
PPARG-207ENST00000397015 KIF21AQ7Z4S6 1674 aa14.47□□□□□ -0.09
PPARG-207ENST00000397015 EHMT2Q96KQ7 1210 aa14.46□□□□□ -0.09
PPARG-207ENST00000397015 POLA1P09884 1462 aaPredicted RBP14.46□□□□□ -0.09
PPARG-207ENST00000397015 MRC2Q9UBG0 1479 aa14.46□□□□□ -0.09
PPARG-207ENST00000397015 CUX2O14529 1486 aa14.45□□□□□ -0.1
PPARG-207ENST00000397015 UBTFP17480 764 aaKnown RBP14.44□□□□□ -0.1
PPARG-207ENST00000397015 ERCC6Q03468 1493 aa14.43□□□□□ -0.1
PPARG-207ENST00000397015 GOLGA3Q08378 1498 aa14.43□□□□□ -0.1
PPARG-207ENST00000397015 ABCA10Q8WWZ4 1543 aa14.42□□□□□ -0.1
PPARG-207ENST00000397015 TNIKQ9UKE5 1360 aa14.42□□□□□ -0.1
PPARG-207ENST00000397015 KIF21BO75037 1637 aa14.41□□□□□ -0.1
PPARG-207ENST00000397015 RAD54L2Q9Y4B4 1467 aa14.39□□□□□ -0.11
PPARG-207ENST00000397015 IGF1RP08069 1367 aa14.39□□□□□ -0.11
PPARG-207ENST00000397015 PRXQ9BXM0 1461 aa14.38□□□□□ -0.11
PPARG-207ENST00000397015 WDR62O43379 1518 aa14.35□□□□□ -0.11
PPARG-207ENST00000397015 ERICH3Q5RHP9 1530 aa14.34□□□□□ -0.11
PPARG-207ENST00000397015 RAPGEF2Q9Y4G8 1499 aa14.33□□□□□ -0.12
PPARG-207ENST00000397015 CARMIL1Q5VZK9 1371 aa14.32□□□□□ -0.12
PPARG-207ENST00000397015 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
PPARG-207ENST00000397015 TDRD9Q8NDG6 1382 aaKnown RBP14.3□□□□□ -0.12
PPARG-207ENST00000397015 GAPVD1Q14C86 1478 aa14.29□□□□□ -0.12
PPARG-207ENST00000397015 CEP162Q5TB80 1403 aa14.28□□□□□ -0.12
PPARG-207ENST00000397015 TARBP1Q13395 1621 aaKnown RBP14.28□□□□□ -0.12
PPARG-207ENST00000397015 WDR97A6NE52 1622 aa14.27□□□□□ -0.13
PPARG-207ENST00000397015 THOC2Q8NI27 1593 aaKnown RBP14.26□□□□□ -0.13
PPARG-207ENST00000397015 ABCA5Q8WWZ7 1642 aa14.24□□□□□ -0.13
PPARG-207ENST00000397015 CUL7Q14999 1698 aa14.22□□□□□ -0.13
PPARG-207ENST00000397015 CLIP1P30622 1438 aa14.21□□□□□ -0.13
PPARG-207ENST00000397015 AQRO60306 1485 aaKnown RBP eCLIP14.2□□□□□ -0.141e-6■■■■□ 26.2
PPARG-207ENST00000397015 GRIN2BQ13224 1484 aa14.19□□□□□ -0.14
PPARG-207ENST00000397015 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
PPARG-207ENST00000397015 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
PPARG-207ENST00000397015 RANGAP1P46060 587 aaPredicted RBP14.13□□□□□ -0.15
PPARG-207ENST00000397015 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
PPARG-207ENST00000397015 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.16
PPARG-207ENST00000397015 VPS8Q8N3P4 1428 aa14.07□□□□□ -0.16
PPARG-207ENST00000397015 MAGI1Q96QZ7 1491 aaPredicted RBP14.07□□□□□ -0.16
PPARG-207ENST00000397015 TRIM26Q12899 539 aaPredicted RBP14.06□□□□□ -0.16
PPARG-207ENST00000397015 ADAMTS12P58397 1594 aa14.06□□□□□ -0.16
PPARG-207ENST00000397015 APLP2Q06481 763 aa14.05□□□□□ -0.16
PPARG-207ENST00000397015 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms