RNA–Protein interactions for RNA: ENST00000409078.7

CLASP1-203, Transcript of cytoplasmic linker associated protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLASP1, Length 8,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-203ENST00000409078 DCAF8L2P0C7V8 631 aa15.53■□□□□ 0.08
CLASP1-203ENST00000409078 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
CLASP1-203ENST00000409078 FAM9AQ8IZU1 332 aaPredicted RBP14.58□□□□□ -0.08
CLASP1-203ENST00000409078 APLP2Q06481 763 aa14.31□□□□□ -0.12
CLASP1-203ENST00000409078 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
CLASP1-203ENST00000409078 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
CLASP1-203ENST00000409078 ERICH6Q7L0X2 663 aa14.09□□□□□ -0.15
CLASP1-203ENST00000409078 CCER1Q8TC90 406 aaPredicted RBP14.05□□□□□ -0.16
CLASP1-203ENST00000409078 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
CLASP1-203ENST00000409078 SHROOM4Q9ULL8 1493 aa13.73□□□□□ -0.21
CLASP1-203ENST00000409078 TTBK1Q5TCY1 1321 aaPredicted RBP13.72□□□□□ -0.21
CLASP1-203ENST00000409078 RANGAP1P46060 587 aaPredicted RBP13.68□□□□□ -0.22
CLASP1-203ENST00000409078 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
CLASP1-203ENST00000409078 NEFLP07196 543 aa13.6□□□□□ -0.23
CLASP1-203ENST00000409078 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.24
CLASP1-203ENST00000409078 CENPBP07199 599 aaPredicted RBP13.53□□□□□ -0.24
CLASP1-203ENST00000409078 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
CLASP1-203ENST00000409078 CHIC1Q5VXU3 224 aa13.43□□□□□ -0.26
CLASP1-203ENST00000409078 MYT1Q01538 1121 aa13.4□□□□□ -0.26
CLASP1-203ENST00000409078 SLC4A1APQ9BWU0 796 aaKnown RBP13.38□□□□□ -0.27
CLASP1-203ENST00000409078 YTHDC1Q96MU7 727 aaKnown RBP13.38□□□□□ -0.27
CLASP1-203ENST00000409078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.34□□□□□ -0.27
CLASP1-203ENST00000409078 HNRNPUL2Q1KMD3 747 aaKnown RBP13.34□□□□□ -0.27
CLASP1-203ENST00000409078 UBTFP17480 764 aaKnown RBP13.33□□□□□ -0.28
CLASP1-203ENST00000409078 POLR3GLQ9BT43 218 aa13.32□□□□□ -0.28
CLASP1-203ENST00000409078 NISCHQ9Y2I1 1504 aa13.25□□□□□ -0.29
CLASP1-203ENST00000409078 ZEB1P37275 1124 aaPredicted RBP13.22□□□□□ -0.29
CLASP1-203ENST00000409078 CLSPNQ9HAW4 1339 aa13.16□□□□□ -0.3
CLASP1-203ENST00000409078 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
CLASP1-203ENST00000409078 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
CLASP1-203ENST00000409078 CNGB1Q14028 1251 aaPredicted RBP13.09□□□□□ -0.31
CLASP1-203ENST00000409078 SLC24A1O60721 1099 aa13.09□□□□□ -0.31
CLASP1-203ENST00000409078 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
CLASP1-203ENST00000409078 ITGAEP38570 1179 aa13□□□□□ -0.33
CLASP1-203ENST00000409078 BCANQ96GW7 911 aa12.95□□□□□ -0.34
CLASP1-203ENST00000409078 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
CLASP1-203ENST00000409078 NEFMP07197 916 aa12.85□□□□□ -0.35
CLASP1-203ENST00000409078 BCL11AQ9H165 835 aa12.84□□□□□ -0.35
CLASP1-203ENST00000409078 PPARGC1BQ86YN6 1023 aaKnown RBP12.78□□□□□ -0.36
CLASP1-203ENST00000409078 ESF1Q9H501 851 aaKnown RBP12.73□□□□□ -0.37
CLASP1-203ENST00000409078 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
CLASP1-203ENST00000409078 TRIM52Q96A61 297 aa12.67□□□□□ -0.38
CLASP1-203ENST00000409078 CDK11BP21127 795 aaKnown RBP12.66□□□□□ -0.38
CLASP1-203ENST00000409078 CDK11AQ9UQ88 783 aaPredicted RBP12.66□□□□□ -0.38
CLASP1-203ENST00000409078 PLPPR3Q6T4P5 718 aa12.62□□□□□ -0.39
CLASP1-203ENST00000409078 FAM50AQ14320 339 aaKnown RBP12.61□□□□□ -0.39
CLASP1-203ENST00000409078 FBLN2P98095 1184 aa12.61□□□□□ -0.39
CLASP1-203ENST00000409078 ZNF326Q5BKZ1 582 aaKnown RBP12.59□□□□□ -0.39
CLASP1-203ENST00000409078 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
CLASP1-203ENST00000409078 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
CLASP1-203ENST00000409078 A0A0G2JS52 829 aa12.55□□□□□ -0.4
CLASP1-203ENST00000409078 SCAF1Q9H7N4 1312 aaKnown RBP12.52□□□□□ -0.4
CLASP1-203ENST00000409078 HSP90AA1P07900 732 aaKnown RBP12.51□□□□□ -0.41
CLASP1-203ENST00000409078 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
CLASP1-203ENST00000409078 TRIM26Q12899 539 aaPredicted RBP12.48□□□□□ -0.41
CLASP1-203ENST00000409078 NEUROD1Q13562 356 aa12.45□□□□□ -0.42
CLASP1-203ENST00000409078 ANP32CO43423 234 aa12.41□□□□□ -0.42
CLASP1-203ENST00000409078 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLASP1-203ENST00000409078 UPF2Q9HAU5 1272 aaKnown RBP12.36□□□□□ -0.43
CLASP1-203ENST00000409078 CHGAP10645 457 aaKnown RBP12.35□□□□□ -0.43
CLASP1-203ENST00000409078 TULP1O00294 542 aaPredicted RBP12.32□□□□□ -0.44
CLASP1-203ENST00000409078 ANP32AP39687 249 aaKnown RBP12.31□□□□□ -0.44
CLASP1-203ENST00000409078 HRCP23327 699 aa12.3□□□□□ -0.44
CLASP1-203ENST00000409078 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
CLASP1-203ENST00000409078 ZNF777Q9ULD5 760 aaPredicted RBP12.26□□□□□ -0.45
CLASP1-203ENST00000409078 C14orf37Q86TY3 774 aa12.26□□□□□ -0.45
CLASP1-203ENST00000409078 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
CLASP1-203ENST00000409078 NPHP1O15259 732 aa12.25□□□□□ -0.45
CLASP1-203ENST00000409078 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
CLASP1-203ENST00000409078 ZBTB7CA1YPR0 619 aa12.23□□□□□ -0.45
CLASP1-203ENST00000409078 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
CLASP1-203ENST00000409078 ARID3CA6NKF2 412 aa12.21□□□□□ -0.45
CLASP1-203ENST00000409078 ARXQ96QS3 562 aa12.21□□□□□ -0.46
CLASP1-203ENST00000409078 MYH16Q9H6N6 1097 aa12.19□□□□□ -0.46
CLASP1-203ENST00000409078 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
CLASP1-203ENST00000409078 GLIPR1L2Q4G1C9 344 aa12.18□□□□□ -0.46
CLASP1-203ENST00000409078 ZRSR1Q15695 479 aaKnown RBP12.14□□□□□ -0.47
CLASP1-203ENST00000409078 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.14□□□□□ -0.47
CLASP1-203ENST00000409078 PABPN1Q86U42 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLASP1-203ENST00000409078 NCLP19338 710 aaKnown RBP12.08□□□□□ -0.47
CLASP1-203ENST00000409078 PPP1R15AO75807 674 aaPredicted RBP12.08□□□□□ -0.48
CLASP1-203ENST00000409078 LOC105371045A0A1W2PR82 267 aa12.07□□□□□ -0.48
CLASP1-203ENST00000409078 CLSTN1O94985 981 aa12.07□□□□□ -0.48
CLASP1-203ENST00000409078 P3H3Q8IVL6 736 aa12.05□□□□□ -0.48
CLASP1-203ENST00000409078 WDR43Q15061 677 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLASP1-203ENST00000409078 ARID4BQ4LE39 1312 aaPredicted RBP12.05□□□□□ -0.48
CLASP1-203ENST00000409078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.04□□□□□ -0.483e-7■■□□□ 12.9
CLASP1-203ENST00000409078 GOLGA2Q08379 1002 aa12.04□□□□□ -0.48
CLASP1-203ENST00000409078 TRIM44Q96DX7 344 aaPredicted RBP12.02□□□□□ -0.49
CLASP1-203ENST00000409078 PRM3Q9NNZ6 103 aa12.01□□□□□ -0.49
CLASP1-203ENST00000409078 SALL2Q9Y467 1007 aaPredicted RBP12□□□□□ -0.49
CLASP1-203ENST00000409078 KRI1Q8N9T8 703 aaKnown RBP11.99□□□□□ -0.49
CLASP1-203ENST00000409078 TMC1Q8TDI8 760 aa11.96□□□□□ -0.49
CLASP1-203ENST00000409078 CASC1Q6TDU7 716 aa11.96□□□□□ -0.49
CLASP1-203ENST00000409078 LMOD2Q6P5Q4 547 aa11.96□□□□□ -0.5
CLASP1-203ENST00000409078 SENP3Q9H4L4 574 aaPredicted RBP11.95□□□□□ -0.5
CLASP1-203ENST00000409078 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
CLASP1-203ENST00000409078 TNNT2P45379 298 aaPredicted RBP11.94□□□□□ -0.5
CLASP1-203ENST00000409078 GOLGA6L22H0YM25 854 aa11.93□□□□□ -0.5
CLASP1-203ENST00000409078 TONSLQ96HA7 1378 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms