RNA–Protein interactions for RNA: ENST00000520071.1

RNF19A-207, Transcript of ring finger protein 19A, RBR E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene RNF19A, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19A-207ENST00000520071 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
RNF19A-207ENST00000520071 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
RNF19A-207ENST00000520071 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
RNF19A-207ENST00000520071 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
RNF19A-207ENST00000520071 FOXD1Q16676 465 aa15.01□□□□□ -0.01
RNF19A-207ENST00000520071 PLPPR3Q6T4P5 718 aa14.24□□□□□ -0.13
RNF19A-207ENST00000520071 MSH5O43196 834 aa14.15□□□□□ -0.14
RNF19A-207ENST00000520071 PIAS4Q8N2W9 510 aaPredicted RBP14.04□□□□□ -0.16
RNF19A-207ENST00000520071 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
RNF19A-207ENST00000520071 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
RNF19A-207ENST00000520071 ADRA2BP18089 450 aa13.89□□□□□ -0.19
RNF19A-207ENST00000520071 NISCHQ9Y2I1 1504 aa13.44□□□□□ -0.26
RNF19A-207ENST00000520071 SCAF1Q9H7N4 1312 aaKnown RBP12.8□□□□□ -0.36
RNF19A-207ENST00000520071 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
RNF19A-207ENST00000520071 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
RNF19A-207ENST00000520071 PPP4R3CPQ6ZMV5 832 aa12.44□□□□□ -0.42
RNF19A-207ENST00000520071 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
RNF19A-207ENST00000520071 CNKSR2Q8WXI2 1034 aa12.25□□□□□ -0.45
RNF19A-207ENST00000520071 DCAF8L1A6NGE4 600 aa12.23□□□□□ -0.45
RNF19A-207ENST00000520071 RNF216Q9NWF9 866 aaPredicted RBP12.18□□□□□ -0.46
RNF19A-207ENST00000520071 CACNB1Q02641 598 aaPredicted RBP12.16□□□□□ -0.46
RNF19A-207ENST00000520071 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
RNF19A-207ENST00000520071 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
RNF19A-207ENST00000520071 DNAJC5BQ9UF47 199 aa11.92□□□□□ -0.5
RNF19A-207ENST00000520071 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
RNF19A-207ENST00000520071 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
RNF19A-207ENST00000520071 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
RNF19A-207ENST00000520071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.68□□□□□ -0.54
RNF19A-207ENST00000520071 KCNA4P22459 653 aa11.44□□□□□ -0.58
RNF19A-207ENST00000520071 U3KPZ7 1027 aaPredicted RBP11.43□□□□□ -0.58
RNF19A-207ENST00000520071 ZCCHC6Q5VYS8 1495 aaKnown RBP11.32□□□□□ -0.6
RNF19A-207ENST00000520071 CAPN15O75808 1086 aa11.27□□□□□ -0.61
RNF19A-207ENST00000520071 SPINK5Q9NQ38 1064 aaPredicted RBP11.26□□□□□ -0.61
RNF19A-207ENST00000520071 SLC4A2P04920 1241 aa11.23□□□□□ -0.61
RNF19A-207ENST00000520071 DSG3P32926 999 aa11.23□□□□□ -0.61
RNF19A-207ENST00000520071 DCAF1Q9Y4B6 1507 aa11.19□□□□□ -0.62
RNF19A-207ENST00000520071 APLP2Q06481 763 aa11.18□□□□□ -0.62
RNF19A-207ENST00000520071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
RNF19A-207ENST00000520071 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
RNF19A-207ENST00000520071 ABCC9O60706 1549 aa11.1□□□□□ -0.63
RNF19A-207ENST00000520071 ZNF219Q9P2Y4 722 aaPredicted RBP11.1□□□□□ -0.63
RNF19A-207ENST00000520071 MYO15BQ96JP2 1530 aa11.09□□□□□ -0.63
RNF19A-207ENST00000520071 TRHP20396 242 aaPredicted RBP11.06□□□□□ -0.64
RNF19A-207ENST00000520071 SAMD1Q6SPF0 538 aaPredicted RBP11.05□□□□□ -0.64
RNF19A-207ENST00000520071 NACADO15069 1562 aa11.01□□□□□ -0.65
RNF19A-207ENST00000520071 ABCB7O75027 752 aa10.98□□□□□ -0.65
RNF19A-207ENST00000520071 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
RNF19A-207ENST00000520071 RB1CC1Q8TDY2 1594 aa10.94□□□□□ -0.66
RNF19A-207ENST00000520071 MYCNP04198 464 aaPredicted RBP10.92□□□□□ -0.66
RNF19A-207ENST00000520071 POTEHQ6S545 545 aa10.89□□□□□ -0.67
RNF19A-207ENST00000520071 SLC4A1APQ9BWU0 796 aaKnown RBP10.8□□□□□ -0.68
RNF19A-207ENST00000520071 SCRIBQ14160 1630 aa10.8□□□□□ -0.68
RNF19A-207ENST00000520071 SHROOM4Q9ULL8 1493 aa10.79□□□□□ -0.68
RNF19A-207ENST00000520071 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
RNF19A-207ENST00000520071 POLA2Q14181 598 aa10.74□□□□□ -0.69
RNF19A-207ENST00000520071 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
RNF19A-207ENST00000520071 UNC13AQ9UPW8 1703 aa10.67□□□□□ -0.7
RNF19A-207ENST00000520071 ATF5Q9Y2D1 282 aaPredicted RBP10.6□□□□□ -0.71
RNF19A-207ENST00000520071 ZBTB12Q9Y330 459 aaPredicted RBP10.6□□□□□ -0.71
RNF19A-207ENST00000520071 BICRAQ9NZM4 1560 aa10.54□□□□□ -0.72
RNF19A-207ENST00000520071 CHRDL2Q6WN34 429 aa10.53□□□□□ -0.72
RNF19A-207ENST00000520071 ZBTB22O15209 634 aa10.5□□□□□ -0.73
RNF19A-207ENST00000520071 AKT1S1Q96B36 256 aa10.48□□□□□ -0.73
RNF19A-207ENST00000520071 ATXN8OSP0DMR3 200 aa10.44□□□□□ -0.74
RNF19A-207ENST00000520071 BAZ1AQ9NRL2 1556 aaPredicted RBP10.43□□□□□ -0.74
RNF19A-207ENST00000520071 OSCARQ8IYS5 282 aa10.42□□□□□ -0.74
RNF19A-207ENST00000520071 SMARCA4P51532 1647 aa10.38□□□□□ -0.75
RNF19A-207ENST00000520071 PABPN1Q86U42 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
RNF19A-207ENST00000520071 CECR2Q9BXF3 1484 aa10.36□□□□□ -0.75
RNF19A-207ENST00000520071 RSF1Q96T23 1441 aaPredicted RBP10.36□□□□□ -0.75
RNF19A-207ENST00000520071 REM2Q8IYK8 340 aaPredicted RBP10.35□□□□□ -0.75
RNF19A-207ENST00000520071 MROH2BQ7Z745 1585 aa10.34□□□□□ -0.75
RNF19A-207ENST00000520071 SUPT5HO00267 1087 aaKnown RBP10.33□□□□□ -0.76
RNF19A-207ENST00000520071 PEG3Q9GZU2 1588 aa10.28□□□□□ -0.76
RNF19A-207ENST00000520071 FBLN2P98095 1184 aa10.28□□□□□ -0.76
RNF19A-207ENST00000520071 WIZO95785 1651 aa10.26□□□□□ -0.77
RNF19A-207ENST00000520071 EIF4G1Q04637 1599 aaKnown RBP10.26□□□□□ -0.77
RNF19A-207ENST00000520071 PITPNM1O00562 1244 aa10.25□□□□□ -0.77
RNF19A-207ENST00000520071 PIP4P2Q8N4L2 257 aa10.25□□□□□ -0.77
RNF19A-207ENST00000520071 SMARCA2P51531 1590 aa10.24□□□□□ -0.77
RNF19A-207ENST00000520071 TOP2AP11388 1531 aaKnown RBP10.23□□□□□ -0.77
RNF19A-207ENST00000520071 SPDYE2BA6NHP3 402 aa10.23□□□□□ -0.77
RNF19A-207ENST00000520071 SPDYE6P0CI01 402 aa10.23□□□□□ -0.77
RNF19A-207ENST00000520071 SPDYE2Q495Y8 402 aa10.23□□□□□ -0.77
RNF19A-207ENST00000520071 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.78
RNF19A-207ENST00000520071 SP7Q8TDD2 431 aaPredicted RBP10.18□□□□□ -0.78
RNF19A-207ENST00000520071 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
RNF19A-207ENST00000520071 HMGXB3Q12766 1538 aa10.17□□□□□ -0.78
RNF19A-207ENST00000520071 BAZ1BQ9UIG0 1483 aaKnown RBP10.15□□□□□ -0.78
RNF19A-207ENST00000520071 MKRN4PQ13434 485 aaPredicted RBP10.12□□□□□ -0.79
RNF19A-207ENST00000520071 NCAPD3P42695 1498 aa10.1□□□□□ -0.79
RNF19A-207ENST00000520071 CC2D2AQ9P2K1 1620 aa10.1□□□□□ -0.79
RNF19A-207ENST00000520071 HAX1O00165 279 aa10.08□□□□□ -0.8
RNF19A-207ENST00000520071 SPDYE1Q8NFV5 336 aaPredicted RBP10.07□□□□□ -0.8
RNF19A-207ENST00000520071 SSUH2Q9Y2M2 353 aa10.07□□□□□ -0.8
RNF19A-207ENST00000520071 ZNF692Q9BU19 519 aaPredicted RBP10.06□□□□□ -0.8
RNF19A-207ENST00000520071 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
RNF19A-207ENST00000520071 CLEC11AQ9Y240 323 aa10.03□□□□□ -0.8
RNF19A-207ENST00000520071 PRKAR2AP13861 404 aaKnown RBP9.98□□□□□ -0.81
RNF19A-207ENST00000520071 CSRNP3Q8WYN3 585 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms