RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 NISCHQ9Y2I1 1504 aa38.89■■■■□ 3.82
TRAPPC9-214ENST00000523777 CCDC180Q9P1Z9 1646 aa34.59■■■■□ 3.13
TRAPPC9-214ENST00000523777 ABCC9O60706 1549 aa33.58■■■□□ 2.97
TRAPPC9-214ENST00000523777 NACADO15069 1562 aa32.49■■■□□ 2.79
TRAPPC9-214ENST00000523777 RB1CC1Q8TDY2 1594 aa32.49■■■□□ 2.79
TRAPPC9-214ENST00000523777 DCAF8L2P0C7V8 631 aa32.42■■■□□ 2.78
TRAPPC9-214ENST00000523777 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
TRAPPC9-214ENST00000523777 MYO15BQ96JP2 1530 aa32.38■■■□□ 2.77
TRAPPC9-214ENST00000523777 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.76
TRAPPC9-214ENST00000523777 UNC13AQ9UPW8 1703 aa31.66■■■□□ 2.66
TRAPPC9-214ENST00000523777 SCRIBQ14160 1630 aa31.46■■■□□ 2.63
TRAPPC9-214ENST00000523777 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.61
TRAPPC9-214ENST00000523777 PABPN1Q86U42 306 aaKnown RBP eCLIP31.38■■■□□ 2.61
TRAPPC9-214ENST00000523777 SHROOM4Q9ULL8 1493 aa31.25■■■□□ 2.59
TRAPPC9-214ENST00000523777 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
TRAPPC9-214ENST00000523777 EIF4G1Q04637 1599 aaKnown RBP30.59■■■□□ 2.49
TRAPPC9-214ENST00000523777 CC2D2AQ9P2K1 1620 aa30.42■■■□□ 2.46
TRAPPC9-214ENST00000523777 CECR2Q9BXF3 1484 aa30.21■■■□□ 2.43
TRAPPC9-214ENST00000523777 BAZ1AQ9NRL2 1556 aaPredicted RBP30.18■■■□□ 2.42
TRAPPC9-214ENST00000523777 SMARCA4P51532 1647 aa30.14■■■□□ 2.42
TRAPPC9-214ENST00000523777 SMARCA2P51531 1590 aa29.98■■■□□ 2.39
TRAPPC9-214ENST00000523777 NCAPD3P42695 1498 aa29.95■■■□□ 2.39
TRAPPC9-214ENST00000523777 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
TRAPPC9-214ENST00000523777 MROH2BQ7Z745 1585 aa29.91■■■□□ 2.38
TRAPPC9-214ENST00000523777 PEG3Q9GZU2 1588 aa29.89■■■□□ 2.38
TRAPPC9-214ENST00000523777 HMGXB3Q12766 1538 aa29.82■■■□□ 2.36
TRAPPC9-214ENST00000523777 BAZ1BQ9UIG0 1483 aaKnown RBP29.74■■■□□ 2.35
TRAPPC9-214ENST00000523777 RSF1Q96T23 1441 aaPredicted RBP29.65■■■□□ 2.34
TRAPPC9-214ENST00000523777 WIZO95785 1651 aa29.61■■■□□ 2.33
TRAPPC9-214ENST00000523777 TOP2AP11388 1531 aaKnown RBP29.36■■■□□ 2.29
TRAPPC9-214ENST00000523777 LAMC3Q9Y6N6 1575 aa29.17■■■□□ 2.26
TRAPPC9-214ENST00000523777 CADPSQ9ULU8 1353 aa29.08■■■□□ 2.25
TRAPPC9-214ENST00000523777 NESP48681 1621 aa29.07■■■□□ 2.24
TRAPPC9-214ENST00000523777 ERCC6Q03468 1493 aa29.02■■■□□ 2.24
TRAPPC9-214ENST00000523777 SUPT5HO00267 1087 aaKnown RBP28.99■■■□□ 2.23
TRAPPC9-214ENST00000523777 CCDC88BA6NC98 1476 aa28.98■■■□□ 2.23
TRAPPC9-214ENST00000523777 PDS5BQ9NTI5 1447 aa28.98■■■□□ 2.23
TRAPPC9-214ENST00000523777 CFTRP13569 1480 aa28.92■■■□□ 2.22
TRAPPC9-214ENST00000523777 KIF21AQ7Z4S6 1674 aa28.78■■■□□ 2.2
TRAPPC9-214ENST00000523777 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
TRAPPC9-214ENST00000523777 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
TRAPPC9-214ENST00000523777 CUX2O14529 1486 aa28.7■■■□□ 2.18
TRAPPC9-214ENST00000523777 CEP164Q9UPV0 1460 aa28.7■■■□□ 2.18
TRAPPC9-214ENST00000523777 THOC2Q8NI27 1593 aaKnown RBP28.66■■■□□ 2.18
TRAPPC9-214ENST00000523777 MRC2Q9UBG0 1479 aa28.62■■■□□ 2.17
TRAPPC9-214ENST00000523777 WDR62O43379 1518 aa28.51■■■□□ 2.15
TRAPPC9-214ENST00000523777 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
TRAPPC9-214ENST00000523777 URB2Q14146 1524 aaKnown RBP28.38■■■□□ 2.13
TRAPPC9-214ENST00000523777 DNMBPQ6XZF7 1577 aa28.28■■■□□ 2.12
TRAPPC9-214ENST00000523777 TOPBP1Q92547 1522 aa28.27■■■□□ 2.12
TRAPPC9-214ENST00000523777 IFT140Q96RY7 1462 aa28.11■■■□□ 2.09
TRAPPC9-214ENST00000523777 CUX1P39880 1505 aa28.07■■■□□ 2.08
TRAPPC9-214ENST00000523777 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
TRAPPC9-214ENST00000523777 WRNQ14191 1432 aaPredicted RBP eCLIP28■■■□□ 2.07
TRAPPC9-214ENST00000523777 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
TRAPPC9-214ENST00000523777 SOGA1O94964 1423 aa27.95■■■□□ 2.07
TRAPPC9-214ENST00000523777 TARBP1Q13395 1621 aaKnown RBP27.93■■■□□ 2.06
TRAPPC9-214ENST00000523777 TOP2BQ02880 1626 aa27.92■■■□□ 2.06
TRAPPC9-214ENST00000523777 BIVM-ERCC5R4GMW8 1640 aa27.92■■■□□ 2.06
TRAPPC9-214ENST00000523777 RAD54L2Q9Y4B4 1467 aa27.86■■■□□ 2.05
TRAPPC9-214ENST00000523777 ZNF608Q9ULD9 1512 aaPredicted RBP27.86■■■□□ 2.05
TRAPPC9-214ENST00000523777 WDR97A6NE52 1622 aa27.85■■■□□ 2.05
TRAPPC9-214ENST00000523777 SYNJ1O43426 1573 aa27.85■■■□□ 2.05
TRAPPC9-214ENST00000523777 EIF4G3O43432 1585 aaKnown RBP27.8■■■□□ 2.04
TRAPPC9-214ENST00000523777 ABCA10Q8WWZ4 1543 aa27.76■■■□□ 2.03
TRAPPC9-214ENST00000523777 AQRO60306 1485 aaKnown RBP eCLIP27.74■■■□□ 2.03
TRAPPC9-214ENST00000523777 TDRD9Q8NDG6 1382 aaKnown RBP27.72■■■□□ 2.03
TRAPPC9-214ENST00000523777 GRIN2BQ13224 1484 aa27.63■■■□□ 2.01
TRAPPC9-214ENST00000523777 GAPVD1Q14C86 1478 aa27.63■■■□□ 2.01
TRAPPC9-214ENST00000523777 DNAJC5Q9H3Z4 198 aa27.62■■■□□ 2.01
TRAPPC9-214ENST00000523777 ABCA5Q8WWZ7 1642 aa27.59■■■□□ 2.01
TRAPPC9-214ENST00000523777 MAGI1Q96QZ7 1491 aaPredicted RBP27.56■■■□□ 2
TRAPPC9-214ENST00000523777 PBRM1Q86U86 1689 aa27.55■■■□□ 2
TRAPPC9-214ENST00000523777 OSCARQ8IYS5 282 aa27.54■■■□□ 2
TRAPPC9-214ENST00000523777 SNAPC4Q5SXM2 1469 aa27.51■■■□□ 2
TRAPPC9-214ENST00000523777 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
TRAPPC9-214ENST00000523777 TRIM41Q8WV44 630 aa27.45■■□□□ 1.98
TRAPPC9-214ENST00000523777 KIF27Q86VH2 1401 aa27.44■■□□□ 1.98
TRAPPC9-214ENST00000523777 FBLN2P98095 1184 aa27.43■■□□□ 1.98
TRAPPC9-214ENST00000523777 CHMP7Q8WUX9 453 aaPredicted RBP27.43■■□□□ 1.98
TRAPPC9-214ENST00000523777 CHD1O14646 1710 aa27.43■■□□□ 1.98
TRAPPC9-214ENST00000523777 SYNJ2O15056 1496 aa27.43■■□□□ 1.98
TRAPPC9-214ENST00000523777 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.97
TRAPPC9-214ENST00000523777 ADAMTS12P58397 1594 aa27.32■■□□□ 1.96
TRAPPC9-214ENST00000523777 IGF1RP08069 1367 aa27.25■■□□□ 1.95
TRAPPC9-214ENST00000523777 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
TRAPPC9-214ENST00000523777 CUL7Q14999 1698 aa27.24■■□□□ 1.95
TRAPPC9-214ENST00000523777 CHIC1Q5VXU3 224 aa27.14■■□□□ 1.94
TRAPPC9-214ENST00000523777 CLASP1Q7Z460 1538 aa27.14■■□□□ 1.94
TRAPPC9-214ENST00000523777 CARMIL1Q5VZK9 1371 aa27.12■■□□□ 1.93
TRAPPC9-214ENST00000523777 NUP160Q12769 1436 aa27.12■■□□□ 1.93
TRAPPC9-214ENST00000523777 RUSC2Q8N2Y8 1516 aa27.07■■□□□ 1.92
TRAPPC9-214ENST00000523777 EEA1Q15075 1411 aa27.06■■□□□ 1.92
TRAPPC9-214ENST00000523777 CEP170Q5SW79 1584 aa27.05■■□□□ 1.92
TRAPPC9-214ENST00000523777 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
TRAPPC9-214ENST00000523777 RIMBP3CA6NJZ7 1639 aa27■■□□□ 1.91
TRAPPC9-214ENST00000523777 RIMBP3BA6NNM3 1639 aa27■■□□□ 1.91
TRAPPC9-214ENST00000523777 RIMBP3Q9UFD9 1639 aa27■■□□□ 1.91
TRAPPC9-214ENST00000523777 RAPGEF2Q9Y4G8 1499 aa27■■□□□ 1.91
TRAPPC9-214ENST00000523777 CSRNP3Q8WYN3 585 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms