RNA–Protein interactions for RNA: ENST00000595519.5

TRPM4-205, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,702 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-205ENST00000595519 NISCHQ9Y2I1 1504 aa30.08■■■□□ 2.41
TRPM4-205ENST00000595519 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
TRPM4-205ENST00000595519 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
TRPM4-205ENST00000595519 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
TRPM4-205ENST00000595519 DCAF1Q9Y4B6 1507 aa24.88■■□□□ 1.57
TRPM4-205ENST00000595519 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
TRPM4-205ENST00000595519 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
TRPM4-205ENST00000595519 PPARGC1BQ86YN6 1023 aaKnown RBP24.69■■□□□ 1.54
TRPM4-205ENST00000595519 HRCP23327 699 aa24.67■■□□□ 1.54
TRPM4-205ENST00000595519 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
TRPM4-205ENST00000595519 MYO15BQ96JP2 1530 aa24.31■■□□□ 1.48
TRPM4-205ENST00000595519 PELP1Q8IZL8 1130 aaKnown RBP24.12■■□□□ 1.45
TRPM4-205ENST00000595519 ABCC9O60706 1549 aa23.96■■□□□ 1.43
TRPM4-205ENST00000595519 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
TRPM4-205ENST00000595519 NACADO15069 1562 aa23.91■■□□□ 1.42
TRPM4-205ENST00000595519 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
TRPM4-205ENST00000595519 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
TRPM4-205ENST00000595519 SCAF1Q9H7N4 1312 aaKnown RBP23.6■■□□□ 1.37
TRPM4-205ENST00000595519 LOC105371045A0A1W2PR82 267 aa23.58■■□□□ 1.37
TRPM4-205ENST00000595519 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
TRPM4-205ENST00000595519 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
TRPM4-205ENST00000595519 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
TRPM4-205ENST00000595519 UNC13AQ9UPW8 1703 aa23.34■■□□□ 1.33
TRPM4-205ENST00000595519 TRIM26Q12899 539 aaPredicted RBP23.31■■□□□ 1.32
TRPM4-205ENST00000595519 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
TRPM4-205ENST00000595519 WIZO95785 1651 aa23.19■■□□□ 1.3
TRPM4-205ENST00000595519 MYT1Q01538 1121 aa23.19■■□□□ 1.3
TRPM4-205ENST00000595519 ZEB1P37275 1124 aaPredicted RBP23.14■■□□□ 1.29
TRPM4-205ENST00000595519 BAZ1AQ9NRL2 1556 aaPredicted RBP23.13■■□□□ 1.29
TRPM4-205ENST00000595519 GTF3C3Q9Y5Q9 886 aa23.1■■□□□ 1.29
TRPM4-205ENST00000595519 FAM9AQ8IZU1 332 aaPredicted RBP23.09■■□□□ 1.29
TRPM4-205ENST00000595519 NEUROD1Q13562 356 aa23.02■■□□□ 1.27
TRPM4-205ENST00000595519 SMARCA4P51532 1647 aa23■■□□□ 1.27
TRPM4-205ENST00000595519 YTHDC1Q96MU7 727 aaKnown RBP22.98■■□□□ 1.27
TRPM4-205ENST00000595519 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
TRPM4-205ENST00000595519 EIF4G1Q04637 1599 aaKnown RBP22.96■■□□□ 1.27
TRPM4-205ENST00000595519 CENPBP07199 599 aaPredicted RBP22.96■■□□□ 1.27
TRPM4-205ENST00000595519 ACIN1Q9UKV3 1341 aaKnown RBP22.96■■□□□ 1.27
TRPM4-205ENST00000595519 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
TRPM4-205ENST00000595519 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
TRPM4-205ENST00000595519 CCER1Q8TC90 406 aaPredicted RBP22.83■■□□□ 1.25
TRPM4-205ENST00000595519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.79■■□□□ 1.24
TRPM4-205ENST00000595519 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
TRPM4-205ENST00000595519 TRIM41Q8WV44 630 aa22.73■■□□□ 1.23
TRPM4-205ENST00000595519 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
TRPM4-205ENST00000595519 DIEXFQ68CQ4 756 aaKnown RBP22.68■■□□□ 1.22
TRPM4-205ENST00000595519 CCDC88BA6NC98 1476 aa22.67■■□□□ 1.22
TRPM4-205ENST00000595519 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.2
TRPM4-205ENST00000595519 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
TRPM4-205ENST00000595519 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
TRPM4-205ENST00000595519 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
TRPM4-205ENST00000595519 SOGA1O94964 1423 aa22.14■■□□□ 1.14
TRPM4-205ENST00000595519 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
TRPM4-205ENST00000595519 HMGXB3Q12766 1538 aa22.13■■□□□ 1.13
TRPM4-205ENST00000595519 EEA1Q15075 1411 aa22.12■■□□□ 1.13
TRPM4-205ENST00000595519 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
TRPM4-205ENST00000595519 NCAPD3P42695 1498 aa22.08■■□□□ 1.13
TRPM4-205ENST00000595519 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.12
TRPM4-205ENST00000595519 MIER1Q8N108 512 aa22.02■■□□□ 1.12
TRPM4-205ENST00000595519 BCL11AQ9H165 835 aa22.02■■□□□ 1.12
TRPM4-205ENST00000595519 ZNF316A6NFI3 1004 aaPredicted RBP22■■□□□ 1.11
TRPM4-205ENST00000595519 TNIKQ9UKE5 1360 aa21.96■■□□□ 1.11
TRPM4-205ENST00000595519 BIVM-ERCC5R4GMW8 1640 aa21.96■■□□□ 1.11
TRPM4-205ENST00000595519 TOP2BQ02880 1626 aa21.96■■□□□ 1.11
TRPM4-205ENST00000595519 KIF21BO75037 1637 aa21.93■■□□□ 1.1
TRPM4-205ENST00000595519 BCANQ96GW7 911 aa21.93■■□□□ 1.1
TRPM4-205ENST00000595519 CSRNP3Q8WYN3 585 aa21.93■■□□□ 1.1
TRPM4-205ENST00000595519 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
TRPM4-205ENST00000595519 GOLGA3Q08378 1498 aa21.88■■□□□ 1.09
TRPM4-205ENST00000595519 HNRNPUL2Q1KMD3 747 aaKnown RBP21.86■■□□□ 1.09
TRPM4-205ENST00000595519 PRDM2Q13029 1718 aa21.85■■□□□ 1.09
TRPM4-205ENST00000595519 CEP164Q9UPV0 1460 aa21.81■■□□□ 1.08
TRPM4-205ENST00000595519 CFTRP13569 1480 aa21.8■■□□□ 1.08
TRPM4-205ENST00000595519 ANP32EQ9BTT0 268 aa21.78■■□□□ 1.08
TRPM4-205ENST00000595519 CUX1P39880 1505 aa21.74■■□□□ 1.07
TRPM4-205ENST00000595519 RANGAP1P46060 587 aaPredicted RBP21.69■■□□□ 1.06
TRPM4-205ENST00000595519 RAPGEF2Q9Y4G8 1499 aa21.66■■□□□ 1.06
TRPM4-205ENST00000595519 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.06
TRPM4-205ENST00000595519 SUPT16HQ9Y5B9 1047 aaKnown RBP21.63■■□□□ 1.05
TRPM4-205ENST00000595519 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
TRPM4-205ENST00000595519 UBTFP17480 764 aaKnown RBP21.62■■□□□ 1.05
TRPM4-205ENST00000595519 PRXQ9BXM0 1461 aa21.6■■□□□ 1.05
TRPM4-205ENST00000595519 TSHZ2Q9NRE2 1034 aa21.57■■□□□ 1.04
TRPM4-205ENST00000595519 ERICH6Q7L0X2 663 aa21.56■■□□□ 1.04
TRPM4-205ENST00000595519 CLIP1P30622 1438 aa21.54■■□□□ 1.04
TRPM4-205ENST00000595519 CADPSQ9ULU8 1353 aa21.52■■□□□ 1.04
TRPM4-205ENST00000595519 VPS8Q8N3P4 1428 aa21.49■■□□□ 1.03
TRPM4-205ENST00000595519 KIF27Q86VH2 1401 aa21.45■■□□□ 1.02
TRPM4-205ENST00000595519 FKBP8Q14318 412 aa21.42■■□□□ 1.02
TRPM4-205ENST00000595519 ITGAEP38570 1179 aa21.42■■□□□ 1.02
TRPM4-205ENST00000595519 NEFLP07196 543 aa21.4■■□□□ 1.02
TRPM4-205ENST00000595519 APLP2Q06481 763 aa21.4■■□□□ 1.02
TRPM4-205ENST00000595519 ARAP1Q96P48 1450 aa21.36■■□□□ 1.01
TRPM4-205ENST00000595519 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1.01
TRPM4-205ENST00000595519 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
TRPM4-205ENST00000595519 DNMBPQ6XZF7 1577 aa21.27■■□□□ 1
TRPM4-205ENST00000595519 IGF1RP08069 1367 aa21.27■■□□□ 1
TRPM4-205ENST00000595519 CUX2O14529 1486 aa21.27■■□□□ 1
TRPM4-205ENST00000595519 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
TRPM4-205ENST00000595519 ARHGAP35Q9NRY4 1499 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms