RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 NISCHQ9Y2I1 1504 aa31.21■■■□□ 2.59
TRPM4-209ENST00000598502 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
TRPM4-209ENST00000598502 DCAF8L2P0C7V8 631 aa26.84■■□□□ 1.89
TRPM4-209ENST00000598502 SUPT5HO00267 1087 aaKnown RBP26.66■■□□□ 1.86
TRPM4-209ENST00000598502 CCDC180Q9P1Z9 1646 aa26.31■■□□□ 1.8
TRPM4-209ENST00000598502 ZCCHC6Q5VYS8 1495 aaKnown RBP26.29■■□□□ 1.8
TRPM4-209ENST00000598502 HRCP23327 699 aa25.81■■□□□ 1.72
TRPM4-209ENST00000598502 PCGF6Q9BYE7 350 aa25.74■■□□□ 1.71
TRPM4-209ENST00000598502 PPARGC1BQ86YN6 1023 aaKnown RBP25.68■■□□□ 1.7
TRPM4-209ENST00000598502 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
TRPM4-209ENST00000598502 DCAF1Q9Y4B6 1507 aa25.31■■□□□ 1.64
TRPM4-209ENST00000598502 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
TRPM4-209ENST00000598502 ABCC9O60706 1549 aa25.15■■□□□ 1.62
TRPM4-209ENST00000598502 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
TRPM4-209ENST00000598502 PELP1Q8IZL8 1130 aaKnown RBP25.06■■□□□ 1.6
TRPM4-209ENST00000598502 LOC105371045A0A1W2PR82 267 aa24.99■■□□□ 1.59
TRPM4-209ENST00000598502 EHMT2Q96KQ7 1210 aa24.78■■□□□ 1.56
TRPM4-209ENST00000598502 RSF1Q96T23 1441 aaPredicted RBP24.77■■□□□ 1.56
TRPM4-209ENST00000598502 FAM9AQ8IZU1 332 aaPredicted RBP24.75■■□□□ 1.55
TRPM4-209ENST00000598502 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
TRPM4-209ENST00000598502 CECR2Q9BXF3 1484 aa24.56■■□□□ 1.52
TRPM4-209ENST00000598502 SCAF1Q9H7N4 1312 aaKnown RBP24.56■■□□□ 1.52
TRPM4-209ENST00000598502 NACADO15069 1562 aa24.52■■□□□ 1.52
TRPM4-209ENST00000598502 TRIM26Q12899 539 aaPredicted RBP24.48■■□□□ 1.51
TRPM4-209ENST00000598502 RB1CC1Q8TDY2 1594 aa24.48■■□□□ 1.51
TRPM4-209ENST00000598502 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
TRPM4-209ENST00000598502 ZEB1P37275 1124 aaPredicted RBP24.29■■□□□ 1.48
TRPM4-209ENST00000598502 PABPN1Q86U42 306 aaKnown RBP eCLIP24.24■■□□□ 1.47
TRPM4-209ENST00000598502 WIZO95785 1651 aa24.22■■□□□ 1.47
TRPM4-209ENST00000598502 MYT1Q01538 1121 aa24.06■■□□□ 1.44
TRPM4-209ENST00000598502 GTF3C3Q9Y5Q9 886 aa24.01■■□□□ 1.43
TRPM4-209ENST00000598502 NEUROD1Q13562 356 aa23.97■■□□□ 1.43
TRPM4-209ENST00000598502 BAZ1AQ9NRL2 1556 aaPredicted RBP23.97■■□□□ 1.43
TRPM4-209ENST00000598502 ACIN1Q9UKV3 1341 aaKnown RBP23.96■■□□□ 1.43
TRPM4-209ENST00000598502 CENPBP07199 599 aaPredicted RBP23.92■■□□□ 1.42
TRPM4-209ENST00000598502 TTBK1Q5TCY1 1321 aaPredicted RBP23.89■■□□□ 1.41
TRPM4-209ENST00000598502 CCER1Q8TC90 406 aaPredicted RBP23.85■■□□□ 1.41
TRPM4-209ENST00000598502 YTHDC1Q96MU7 727 aaKnown RBP23.82■■□□□ 1.4
TRPM4-209ENST00000598502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.8■■□□□ 1.4
TRPM4-209ENST00000598502 CCDC88BA6NC98 1476 aa23.77■■□□□ 1.4
TRPM4-209ENST00000598502 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
TRPM4-209ENST00000598502 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
TRPM4-209ENST00000598502 UNC13AQ9UPW8 1703 aa23.74■■□□□ 1.39
TRPM4-209ENST00000598502 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
TRPM4-209ENST00000598502 DIEXFQ68CQ4 756 aaKnown RBP23.69■■□□□ 1.38
TRPM4-209ENST00000598502 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.38
TRPM4-209ENST00000598502 SMARCA2P51531 1590 aa23.6■■□□□ 1.37
TRPM4-209ENST00000598502 SOGA1O94964 1423 aa23.56■■□□□ 1.36
TRPM4-209ENST00000598502 BICRAQ9NZM4 1560 aa23.53■■□□□ 1.36
TRPM4-209ENST00000598502 RANGAP1P46060 587 aaPredicted RBP23.52■■□□□ 1.35
TRPM4-209ENST00000598502 EIF4G1Q04637 1599 aaKnown RBP23.5■■□□□ 1.35
TRPM4-209ENST00000598502 CSRNP3Q8WYN3 585 aa23.48■■□□□ 1.35
TRPM4-209ENST00000598502 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
TRPM4-209ENST00000598502 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
TRPM4-209ENST00000598502 CEP162Q5TB80 1403 aa23.34■■□□□ 1.33
TRPM4-209ENST00000598502 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
TRPM4-209ENST00000598502 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
TRPM4-209ENST00000598502 TNIKQ9UKE5 1360 aa23.21■■□□□ 1.31
TRPM4-209ENST00000598502 EEA1Q15075 1411 aa23.14■■□□□ 1.3
TRPM4-209ENST00000598502 GOLGA3Q08378 1498 aa23.12■■□□□ 1.29
TRPM4-209ENST00000598502 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
TRPM4-209ENST00000598502 PEG3Q9GZU2 1588 aa23.09■■□□□ 1.29
TRPM4-209ENST00000598502 HNRNPUL2Q1KMD3 747 aaKnown RBP23.09■■□□□ 1.29
TRPM4-209ENST00000598502 APLP2Q06481 763 aa23.07■■□□□ 1.28
TRPM4-209ENST00000598502 ZNF316A6NFI3 1004 aaPredicted RBP23.06■■□□□ 1.28
TRPM4-209ENST00000598502 MIER1Q8N108 512 aa23.02■■□□□ 1.28
TRPM4-209ENST00000598502 CLIP1P30622 1438 aa22.98■■□□□ 1.27
TRPM4-209ENST00000598502 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
TRPM4-209ENST00000598502 RAPGEF2Q9Y4G8 1499 aa22.94■■□□□ 1.26
TRPM4-209ENST00000598502 NCAPD3P42695 1498 aa22.77■■□□□ 1.24
TRPM4-209ENST00000598502 BCL11AQ9H165 835 aa22.75■■□□□ 1.23
TRPM4-209ENST00000598502 KIF21BO75037 1637 aa22.75■■□□□ 1.23
TRPM4-209ENST00000598502 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
TRPM4-209ENST00000598502 BCANQ96GW7 911 aa22.73■■□□□ 1.23
TRPM4-209ENST00000598502 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
TRPM4-209ENST00000598502 CUX1P39880 1505 aa22.66■■□□□ 1.22
TRPM4-209ENST00000598502 ITGAEP38570 1179 aa22.66■■□□□ 1.22
TRPM4-209ENST00000598502 ANP32EQ9BTT0 268 aa22.64■■□□□ 1.22
TRPM4-209ENST00000598502 HMGXB3Q12766 1538 aa22.64■■□□□ 1.21
TRPM4-209ENST00000598502 KIF27Q86VH2 1401 aa22.64■■□□□ 1.21
TRPM4-209ENST00000598502 KANK4Q5T7N3 995 aaPredicted RBP22.62■■□□□ 1.21
TRPM4-209ENST00000598502 ATP1B4Q9UN42 357 aaPredicted RBP22.62■■□□□ 1.21
TRPM4-209ENST00000598502 SUPT16HQ9Y5B9 1047 aaKnown RBP22.6■■□□□ 1.21
TRPM4-209ENST00000598502 CFTRP13569 1480 aa22.59■■□□□ 1.21
TRPM4-209ENST00000598502 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
TRPM4-209ENST00000598502 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
TRPM4-209ENST00000598502 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
TRPM4-209ENST00000598502 CUX2O14529 1486 aa22.53■■□□□ 1.2
TRPM4-209ENST00000598502 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
TRPM4-209ENST00000598502 TSHZ2Q9NRE2 1034 aa22.5■■□□□ 1.19
TRPM4-209ENST00000598502 ARAP1Q96P48 1450 aa22.46■■□□□ 1.19
TRPM4-209ENST00000598502 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
TRPM4-209ENST00000598502 IGF1RP08069 1367 aa22.4■■□□□ 1.18
TRPM4-209ENST00000598502 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
TRPM4-209ENST00000598502 CC2D2AQ9P2K1 1620 aa22.37■■□□□ 1.17
TRPM4-209ENST00000598502 FGD5Q6ZNL6 1462 aa22.37■■□□□ 1.17
TRPM4-209ENST00000598502 ARHGAP35Q9NRY4 1499 aa22.32■■□□□ 1.16
TRPM4-209ENST00000598502 FKBP8Q14318 412 aa22.31■■□□□ 1.16
TRPM4-209ENST00000598502 ERICH6Q7L0X2 663 aa22.3■■□□□ 1.16
TRPM4-209ENST00000598502 NESP48681 1621 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms