RNA–Protein interactions for RNA: ENST00000438682.5

PPARG-211, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 3

Gene PPARG, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-211ENST00000438682 AEBP2Q6ZN18 517 aaPredicted RBP33.52■■■□□ 2.96
PPARG-211ENST00000438682 CHIC1Q5VXU3 224 aa32.59■■■□□ 2.81
PPARG-211ENST00000438682 PHF23Q9BUL5 403 aaPredicted RBP28.65■■■□□ 2.18
PPARG-211ENST00000438682 SENP3Q9H4L4 574 aaPredicted RBP28.48■■■□□ 2.15
PPARG-211ENST00000438682 FOXD1Q16676 465 aa26.46■■□□□ 1.83
PPARG-211ENST00000438682 PLPPR3Q6T4P5 718 aa26.43■■□□□ 1.82
PPARG-211ENST00000438682 ADRA2BP18089 450 aa25.35■■□□□ 1.65
PPARG-211ENST00000438682 PPP6R1Q9UPN7 881 aa25.35■■□□□ 1.65
PPARG-211ENST00000438682 PIAS4Q8N2W9 510 aaPredicted RBP24.96■■□□□ 1.59
PPARG-211ENST00000438682 MSH5O43196 834 aa24.46■■□□□ 1.51
PPARG-211ENST00000438682 PPP4R3CPQ6ZMV5 832 aa23.29■■□□□ 1.32
PPARG-211ENST00000438682 SCAF1Q9H7N4 1312 aaKnown RBP23.19■■□□□ 1.3
PPARG-211ENST00000438682 MAPK8IP2Q13387 824 aaPredicted RBP23.06■■□□□ 1.28
PPARG-211ENST00000438682 DMRT2Q9Y5R5 561 aa22.69■■□□□ 1.22
PPARG-211ENST00000438682 CNKSR2Q8WXI2 1034 aa22.65■■□□□ 1.22
PPARG-211ENST00000438682 NCBP3Q53F19 620 aaKnown RBP22.63■■□□□ 1.21
PPARG-211ENST00000438682 KCNA4P22459 653 aa22.57■■□□□ 1.2
PPARG-211ENST00000438682 POTEDQ86YR6 584 aa22.54■■□□□ 1.2
PPARG-211ENST00000438682 NPM3O75607 178 aaKnown RBP22.29■■□□□ 1.16
PPARG-211ENST00000438682 RNF216Q9NWF9 866 aaPredicted RBP22.22■■□□□ 1.15
PPARG-211ENST00000438682 HOXD11P31277 338 aaPredicted RBP22.15■■□□□ 1.14
PPARG-211ENST00000438682 DCAF8L1A6NGE4 600 aa21.87■■□□□ 1.09
PPARG-211ENST00000438682 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
PPARG-211ENST00000438682 SLC4A1APQ9BWU0 796 aaKnown RBP21.49■■□□□ 1.03
PPARG-211ENST00000438682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.21■□□□□ 0.992e-7■□□□□ 10.1
PPARG-211ENST00000438682 SLC4A2P04920 1241 aa21.06■□□□□ 0.96
PPARG-211ENST00000438682 RNF39Q9H2S5 420 aa20.92■□□□□ 0.94
PPARG-211ENST00000438682 FOXD4L1Q9NU39 408 aa20.81■□□□□ 0.92
PPARG-211ENST00000438682 U3KPZ7 1027 aaPredicted RBP20.79■□□□□ 0.92
PPARG-211ENST00000438682 EHMT2Q96KQ7 1210 aa20.77■□□□□ 0.92
PPARG-211ENST00000438682 ZBTB22O15209 634 aa20.73■□□□□ 0.91
PPARG-211ENST00000438682 C1QBPQ07021 282 aaKnown RBP20.67■□□□□ 0.9
PPARG-211ENST00000438682 MYCNP04198 464 aaPredicted RBP20.59■□□□□ 0.89
PPARG-211ENST00000438682 CACNB1Q02641 598 aaPredicted RBP20.57■□□□□ 0.88
PPARG-211ENST00000438682 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
PPARG-211ENST00000438682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.48■□□□□ 0.87
PPARG-211ENST00000438682 HNRNPUL2Q1KMD3 747 aaKnown RBP20.48■□□□□ 0.87
PPARG-211ENST00000438682 SAMD1Q6SPF0 538 aaPredicted RBP20.4■□□□□ 0.86
PPARG-211ENST00000438682 APLP2Q06481 763 aa20.31■□□□□ 0.84
PPARG-211ENST00000438682 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
PPARG-211ENST00000438682 CAPN15O75808 1086 aa20.26■□□□□ 0.83
PPARG-211ENST00000438682 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
PPARG-211ENST00000438682 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
PPARG-211ENST00000438682 ZNF219Q9P2Y4 722 aaPredicted RBP20.06■□□□□ 0.8
PPARG-211ENST00000438682 ATXN8OSP0DMR3 200 aa20.04■□□□□ 0.8
PPARG-211ENST00000438682 DSG3P32926 999 aa19.88■□□□□ 0.77
PPARG-211ENST00000438682 ABCB7O75027 752 aa19.86■□□□□ 0.77
PPARG-211ENST00000438682 POLA2Q14181 598 aa19.74■□□□□ 0.75
PPARG-211ENST00000438682 ZBTB12Q9Y330 459 aaPredicted RBP19.35■□□□□ 0.69
PPARG-211ENST00000438682 FBLN2P98095 1184 aa19.26■□□□□ 0.67
PPARG-211ENST00000438682 MKRN4PQ13434 485 aaPredicted RBP19.17■□□□□ 0.66
PPARG-211ENST00000438682 OSCARQ8IYS5 282 aa19.07■□□□□ 0.64
PPARG-211ENST00000438682 RBM42Q9BTD8 480 aaKnown RBP18.96■□□□□ 0.63
PPARG-211ENST00000438682 SPDYE2BA6NHP3 402 aa18.81■□□□□ 0.6
PPARG-211ENST00000438682 SPDYE6P0CI01 402 aa18.81■□□□□ 0.6
PPARG-211ENST00000438682 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
PPARG-211ENST00000438682 ZNF692Q9BU19 519 aaPredicted RBP18.78■□□□□ 0.6
PPARG-211ENST00000438682 SPDYE4A6NLX3 237 aa18.71■□□□□ 0.59
PPARG-211ENST00000438682 AKT1S1Q96B36 256 aa18.68■□□□□ 0.58
PPARG-211ENST00000438682 SSUH2Q9Y2M2 353 aa18.62■□□□□ 0.57
PPARG-211ENST00000438682 FKBP8Q14318 412 aa18.61■□□□□ 0.57
PPARG-211ENST00000438682 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
PPARG-211ENST00000438682 REM2Q8IYK8 340 aaPredicted RBP18.52■□□□□ 0.56
PPARG-211ENST00000438682 CLEC11AQ9Y240 323 aa18.34■□□□□ 0.53
PPARG-211ENST00000438682 SPDYE1Q8NFV5 336 aaPredicted RBP18.32■□□□□ 0.52
PPARG-211ENST00000438682 PITPNM1O00562 1244 aa18.31■□□□□ 0.52
PPARG-211ENST00000438682 PROM2Q8N271 834 aa18.26■□□□□ 0.51
PPARG-211ENST00000438682 CHRDL2Q6WN34 429 aa18.23■□□□□ 0.51
PPARG-211ENST00000438682 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
PPARG-211ENST00000438682 PRR29P0C7W0 189 aa18.11■□□□□ 0.49
PPARG-211ENST00000438682 FXR2P51116 673 aaKnown RBP eCLIP17.97■□□□□ 0.47
PPARG-211ENST00000438682 PIP4P2Q8N4L2 257 aa17.97■□□□□ 0.47
PPARG-211ENST00000438682 FBXO3Q9UK99 471 aa17.96■□□□□ 0.47
PPARG-211ENST00000438682 PRKAR2AP13861 404 aaKnown RBP17.88■□□□□ 0.45
PPARG-211ENST00000438682 CHADLQ6NUI6 762 aa17.88■□□□□ 0.45
PPARG-211ENST00000438682 POTEHQ6S545 545 aa17.84■□□□□ 0.45
PPARG-211ENST00000438682 MIER1Q8N108 512 aa17.81■□□□□ 0.44
PPARG-211ENST00000438682 CREBZFQ9NS37 354 aa17.78■□□□□ 0.44
PPARG-211ENST00000438682 PLCD3Q8N3E9 789 aa17.76■□□□□ 0.43
PPARG-211ENST00000438682 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
PPARG-211ENST00000438682 VASPP50552 380 aaPredicted RBP17.7■□□□□ 0.42
PPARG-211ENST00000438682 FARP1Q9Y4F1 1045 aaPredicted RBP17.64■□□□□ 0.41
PPARG-211ENST00000438682 MNX1P50219 401 aaPredicted RBP17.54■□□□□ 0.4
PPARG-211ENST00000438682 KLHL34Q8N239 644 aa17.53■□□□□ 0.4
PPARG-211ENST00000438682 NPM1P06748 294 aaKnown RBP eCLIP17.52■□□□□ 0.4
PPARG-211ENST00000438682 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
PPARG-211ENST00000438682 HAX1O00165 279 aa17.5■□□□□ 0.39
PPARG-211ENST00000438682 IFNLR1Q8IU57 520 aaPredicted RBP17.46■□□□□ 0.39
PPARG-211ENST00000438682 C19orf67A6NJJ6 358 aa17.36■□□□□ 0.37
PPARG-211ENST00000438682 CD44P16070 742 aaKnown RBP17.36■□□□□ 0.37
PPARG-211ENST00000438682 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
PPARG-211ENST00000438682 EVX2Q03828 476 aa17.29■□□□□ 0.36
PPARG-211ENST00000438682 SPOCK2Q92563 424 aa17.29■□□□□ 0.36
PPARG-211ENST00000438682 NUBP1P53384 320 aa17.28■□□□□ 0.36
PPARG-211ENST00000438682 RASEFQ8IZ41 740 aa17.27■□□□□ 0.36
PPARG-211ENST00000438682 TSPYL2Q9H2G4 693 aaPredicted RBP17.27■□□□□ 0.36
PPARG-211ENST00000438682 ZRANB1Q9UGI0 708 aa17.26■□□□□ 0.35
PPARG-211ENST00000438682 DCAF8Q5TAQ9 597 aa17.19■□□□□ 0.34
PPARG-211ENST00000438682 FAM212AQ96EL1 285 aa17.19■□□□□ 0.34
PPARG-211ENST00000438682 CIZ1Q9ULV3 898 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms