RNA–Protein interactions for RNA: ENST00000397000.5

PPARG-204, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 1 (best) BASIC

Gene PPARG, Length 1,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-204ENST00000397000 AEBP2Q6ZN18 517 aaPredicted RBP28.3■■■□□ 2.12
PPARG-204ENST00000397000 CHIC1Q5VXU3 224 aa26.79■■□□□ 1.88
PPARG-204ENST00000397000 SENP3Q9H4L4 574 aaPredicted RBP24■■□□□ 1.43
PPARG-204ENST00000397000 PHF23Q9BUL5 403 aaPredicted RBP23.71■■□□□ 1.39
PPARG-204ENST00000397000 FOXD1Q16676 465 aa22.45■■□□□ 1.18
PPARG-204ENST00000397000 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
PPARG-204ENST00000397000 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
PPARG-204ENST00000397000 MSH5O43196 834 aa20.92■□□□□ 0.94
PPARG-204ENST00000397000 PIAS4Q8N2W9 510 aaPredicted RBP20.88■□□□□ 0.93
PPARG-204ENST00000397000 ADRA2BP18089 450 aa20.87■□□□□ 0.93
PPARG-204ENST00000397000 POTEDQ86YR6 584 aa20.53■□□□□ 0.88
PPARG-204ENST00000397000 MAPK8IP2Q13387 824 aaPredicted RBP19.19■□□□□ 0.66
PPARG-204ENST00000397000 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
PPARG-204ENST00000397000 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
PPARG-204ENST00000397000 PPP4R3CPQ6ZMV5 832 aa18.7■□□□□ 0.58
PPARG-204ENST00000397000 HOXD11P31277 338 aaPredicted RBP18.41■□□□□ 0.54
PPARG-204ENST00000397000 CNKSR2Q8WXI2 1034 aa18.34■□□□□ 0.53
PPARG-204ENST00000397000 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
PPARG-204ENST00000397000 DCAF8L1A6NGE4 600 aa18.09■□□□□ 0.49
PPARG-204ENST00000397000 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
PPARG-204ENST00000397000 CACNB1Q02641 598 aaPredicted RBP17.89■□□□□ 0.45
PPARG-204ENST00000397000 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
PPARG-204ENST00000397000 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
PPARG-204ENST00000397000 NPM3O75607 178 aaKnown RBP17.76■□□□□ 0.43
PPARG-204ENST00000397000 C1QBPQ07021 282 aaKnown RBP17.61■□□□□ 0.41
PPARG-204ENST00000397000 KCNA4P22459 653 aa17.41■□□□□ 0.38
PPARG-204ENST00000397000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.372e-7■□□□□ 10.1
PPARG-204ENST00000397000 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
PPARG-204ENST00000397000 SLC4A2P04920 1241 aa17.03■□□□□ 0.32
PPARG-204ENST00000397000 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
PPARG-204ENST00000397000 DSG3P32926 999 aa16.78■□□□□ 0.28
PPARG-204ENST00000397000 CAPN15O75808 1086 aa16.72■□□□□ 0.27
PPARG-204ENST00000397000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.5■□□□□ 0.23
PPARG-204ENST00000397000 HNRNPUL2Q1KMD3 747 aaKnown RBP16.5■□□□□ 0.23
PPARG-204ENST00000397000 APLP2Q06481 763 aa16.47■□□□□ 0.23
PPARG-204ENST00000397000 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
PPARG-204ENST00000397000 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
PPARG-204ENST00000397000 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
PPARG-204ENST00000397000 ABCB7O75027 752 aa16.38■□□□□ 0.21
PPARG-204ENST00000397000 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
PPARG-204ENST00000397000 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
PPARG-204ENST00000397000 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
PPARG-204ENST00000397000 ZBTB22O15209 634 aa16.1■□□□□ 0.17
PPARG-204ENST00000397000 ATF5Q9Y2D1 282 aaPredicted RBP16.09■□□□□ 0.17
PPARG-204ENST00000397000 POLA2Q14181 598 aa16.05■□□□□ 0.16
PPARG-204ENST00000397000 POTEHQ6S545 545 aa16.04■□□□□ 0.16
PPARG-204ENST00000397000 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
PPARG-204ENST00000397000 NISCHQ9Y2I1 1504 aa15.81■□□□□ 0.12
PPARG-204ENST00000397000 ATXN8OSP0DMR3 200 aa15.71■□□□□ 0.11
PPARG-204ENST00000397000 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
PPARG-204ENST00000397000 CHRDL2Q6WN34 429 aa15.61■□□□□ 0.09
PPARG-204ENST00000397000 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
PPARG-204ENST00000397000 AKT1S1Q96B36 256 aa15.58■□□□□ 0.08
PPARG-204ENST00000397000 REM2Q8IYK8 340 aaPredicted RBP15.44■□□□□ 0.06
PPARG-204ENST00000397000 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
PPARG-204ENST00000397000 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
PPARG-204ENST00000397000 SPDYE2BA6NHP3 402 aa15.27■□□□□ 0.04
PPARG-204ENST00000397000 SPDYE6P0CI01 402 aa15.27■□□□□ 0.04
PPARG-204ENST00000397000 FBLN2P98095 1184 aa15.27■□□□□ 0.04
PPARG-204ENST00000397000 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.04
PPARG-204ENST00000397000 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
PPARG-204ENST00000397000 PIP4P2Q8N4L2 257 aa15.26■□□□□ 0.03
PPARG-204ENST00000397000 FXR2P51116 673 aaKnown RBP eCLIP15.2■□□□□ 0.02
PPARG-204ENST00000397000 SSUH2Q9Y2M2 353 aa15.16■□□□□ 0.02
PPARG-204ENST00000397000 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
PPARG-204ENST00000397000 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
PPARG-204ENST00000397000 SPDYE1Q8NFV5 336 aaPredicted RBP14.96□□□□□ -0.01
PPARG-204ENST00000397000 EHMT2Q96KQ7 1210 aa14.92□□□□□ -0.02
PPARG-204ENST00000397000 CLEC11AQ9Y240 323 aa14.87□□□□□ -0.03
PPARG-204ENST00000397000 HAX1O00165 279 aa14.86□□□□□ -0.03
PPARG-204ENST00000397000 EVX2Q03828 476 aa14.86□□□□□ -0.03
PPARG-204ENST00000397000 PRKAR2AP13861 404 aaKnown RBP14.84□□□□□ -0.03
PPARG-204ENST00000397000 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
PPARG-204ENST00000397000 C19orf67A6NJJ6 358 aa14.71□□□□□ -0.05
PPARG-204ENST00000397000 CHADLQ6NUI6 762 aa14.69□□□□□ -0.06
PPARG-204ENST00000397000 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
PPARG-204ENST00000397000 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
PPARG-204ENST00000397000 FARP1Q9Y4F1 1045 aaPredicted RBP14.48□□□□□ -0.09
PPARG-204ENST00000397000 GABBR2O75899 941 aa14.45□□□□□ -0.1
PPARG-204ENST00000397000 CREBZFQ9NS37 354 aa14.42□□□□□ -0.1
PPARG-204ENST00000397000 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
PPARG-204ENST00000397000 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
PPARG-204ENST00000397000 PROM2Q8N271 834 aa14.34□□□□□ -0.11
PPARG-204ENST00000397000 MNX1P50219 401 aaPredicted RBP14.25□□□□□ -0.13
PPARG-204ENST00000397000 CCDC180Q9P1Z9 1646 aa14.24□□□□□ -0.13
PPARG-204ENST00000397000 POTEIP0CG38 1075 aa14.24□□□□□ -0.13
PPARG-204ENST00000397000 ZNF579Q8NAF0 562 aaKnown RBP14.23□□□□□ -0.13
PPARG-204ENST00000397000 CLCN6P51797 869 aa14.16□□□□□ -0.14
PPARG-204ENST00000397000 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
PPARG-204ENST00000397000 ABCC9O60706 1549 aa14.05□□□□□ -0.16
PPARG-204ENST00000397000 LHX8Q68G74 356 aa14.05□□□□□ -0.16
PPARG-204ENST00000397000 GALR2O43603 387 aaPredicted RBP14.04□□□□□ -0.16
PPARG-204ENST00000397000 NPM1P06748 294 aaKnown RBP eCLIP14□□□□□ -0.17
PPARG-204ENST00000397000 PHF12Q96QT6 1004 aa14□□□□□ -0.17
PPARG-204ENST00000397000 PAK3O75914 559 aaPredicted RBP13.93□□□□□ -0.18
PPARG-204ENST00000397000 DCBLD2Q96PD2 775 aa13.93□□□□□ -0.18
PPARG-204ENST00000397000 CCDC61Q9Y6R9 512 aa13.85□□□□□ -0.19
PPARG-204ENST00000397000 MS4A3Q96HJ5 214 aa13.84□□□□□ -0.19
PPARG-204ENST00000397000 PELP1Q8IZL8 1130 aaKnown RBP13.81□□□□□ -0.2
PPARG-204ENST00000397000 POTEB2H3BUK9 544 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms