Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LCN1P31025 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LCN1P31025 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.51■□□□□ 0.87
LCN1P31025 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.51■□□□□ 0.87
LCN1P31025 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.51■□□□□ 0.87
LCN1P31025 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.51■□□□□ 0.87
LCN1P31025 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.51■□□□□ 0.87
LCN1P31025 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LCN1P31025 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LCN1P31025 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LCN1P31025 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LCN1P31025 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LCN1P31025 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCN1P31025 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.5■□□□□ 0.87
LCN1P31025 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LCN1P31025 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCN1P31025 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LCN1P31025 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCN1P31025 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.5■□□□□ 0.87
LCN1P31025 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.5■□□□□ 0.87
LCN1P31025 AL512631.2-201ENST00000604634 923 ntBASIC20.5■□□□□ 0.87
LCN1P31025 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.5■□□□□ 0.87
LCN1P31025 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCN1P31025 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCN1P31025 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCN1P31025 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
LCN1P31025 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.5■□□□□ 0.87
LCN1P31025 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.49■□□□□ 0.87
LCN1P31025 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.49■□□□□ 0.87
LCN1P31025 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.49■□□□□ 0.87
LCN1P31025 SRD5A1P1-201ENST00000442297 786 ntBASIC20.49■□□□□ 0.87
LCN1P31025 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.49■□□□□ 0.87
LCN1P31025 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.49■□□□□ 0.87
LCN1P31025 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LCN1P31025 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.49■□□□□ 0.87
LCN1P31025 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCN1P31025 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCN1P31025 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCN1P31025 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCN1P31025 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCN1P31025 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.48■□□□□ 0.87
LCN1P31025 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCN1P31025 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.48■□□□□ 0.87
LCN1P31025 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.48■□□□□ 0.87
LCN1P31025 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCN1P31025 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCN1P31025 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCN1P31025 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.48■□□□□ 0.87
LCN1P31025 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LCN1P31025 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.48■□□□□ 0.87
LCN1P31025 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCN1P31025 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.47■□□□□ 0.87
LCN1P31025 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LCN1P31025 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LCN1P31025 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCN1P31025 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCN1P31025 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.47■□□□□ 0.87
LCN1P31025 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.47■□□□□ 0.87
LCN1P31025 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.47■□□□□ 0.87
LCN1P31025 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCN1P31025 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LCN1P31025 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCN1P31025 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LCN1P31025 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCN1P31025 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCN1P31025 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCN1P31025 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCN1P31025 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LCN1P31025 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.46■□□□□ 0.87
LCN1P31025 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.46■□□□□ 0.87
LCN1P31025 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCN1P31025 AL499627.2-201ENST00000606283 725 ntBASIC20.46■□□□□ 0.87
LCN1P31025 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.46■□□□□ 0.87
LCN1P31025 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCN1P31025 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LCN1P31025 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LCN1P31025 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LCN1P31025 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.45■□□□□ 0.86
LCN1P31025 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
LCN1P31025 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCN1P31025 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCN1P31025 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LCN1P31025 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LCN1P31025 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCN1P31025 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LCN1P31025 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCN1P31025 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCN1P31025 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCN1P31025 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.44■□□□□ 0.86
LCN1P31025 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LCN1P31025 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.44■□□□□ 0.86
LCN1P31025 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LCN1P31025 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms