Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SCN2BO60939 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN2BO60939 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.07■□□□□ 0.96
SCN2BO60939 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN2BO60939 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN2BO60939 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.07■□□□□ 0.96
SCN2BO60939 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN2BO60939 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN2BO60939 AC242852.2-201ENST00000615738 1807 ntBASIC21.06■□□□□ 0.96
SCN2BO60939 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN2BO60939 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN2BO60939 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SCN2BO60939 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SCN2BO60939 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN2BO60939 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.06■□□□□ 0.96
SCN2BO60939 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN2BO60939 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN2BO60939 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN2BO60939 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SCN2BO60939 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN2BO60939 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN2BO60939 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN2BO60939 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN2BO60939 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN2BO60939 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN2BO60939 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN2BO60939 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN2BO60939 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN2BO60939 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN2BO60939 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SCN2BO60939 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN2BO60939 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN2BO60939 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCN2BO60939 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN2BO60939 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.04■□□□□ 0.96
SCN2BO60939 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SCN2BO60939 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SCN2BO60939 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN2BO60939 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN2BO60939 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.04■□□□□ 0.96
SCN2BO60939 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN2BO60939 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.04■□□□□ 0.96
SCN2BO60939 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.04■□□□□ 0.96
SCN2BO60939 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN2BO60939 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN2BO60939 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN2BO60939 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN2BO60939 CLDN5-201ENST00000403084 2357 ntBASIC21.03■□□□□ 0.96
SCN2BO60939 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.03■□□□□ 0.96
SCN2BO60939 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN2BO60939 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN2BO60939 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.03■□□□□ 0.96
SCN2BO60939 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN2BO60939 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN2BO60939 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
SCN2BO60939 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.03■□□□□ 0.96
SCN2BO60939 AC005703.6-201ENST00000623265 1329 ntBASIC21.03■□□□□ 0.96
SCN2BO60939 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN2BO60939 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.02■□□□□ 0.96
SCN2BO60939 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SCN2BO60939 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN2BO60939 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.02■□□□□ 0.96
SCN2BO60939 AC087742.1-201ENST00000575880 1738 ntBASIC21.02■□□□□ 0.96
SCN2BO60939 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.02■□□□□ 0.96
SCN2BO60939 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SCN2BO60939 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.02■□□□□ 0.96
SCN2BO60939 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.02■□□□□ 0.96
SCN2BO60939 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN2BO60939 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN2BO60939 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN2BO60939 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN2BO60939 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN2BO60939 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.02■□□□□ 0.96
SCN2BO60939 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN2BO60939 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN2BO60939 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN2BO60939 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN2BO60939 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SCN2BO60939 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SCN2BO60939 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN2BO60939 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21■□□□□ 0.95
SCN2BO60939 AC139530.1-201ENST00000575312 1977 ntBASIC21■□□□□ 0.95
SCN2BO60939 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCN2BO60939 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCN2BO60939 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN2BO60939 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN2BO60939 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms