Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 AC018445.4-201ENST00000624066 2291 ntBASIC14.43□□□□□ -0.1
LMO3Q8TAP4 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 JAML-211ENST00000533261 1508 ntTSL 5 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 RN7SKP102-201ENST00000411186 315 ntBASIC14.43□□□□□ -0.1
LMO3Q8TAP4 FAM21EP-201ENST00000417804 985 ntBASIC14.43□□□□□ -0.1
LMO3Q8TAP4 AC108734.2-201ENST00000420887 1069 ntBASIC14.43□□□□□ -0.1
LMO3Q8TAP4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 METTL23-211ENST00000589977 617 ntTSL 3 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 MIR3147-201ENST00000577811 66 ntBASIC14.42□□□□□ -0.1
LMO3Q8TAP4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 CSTP2-201ENST00000610599 398 ntBASIC14.42□□□□□ -0.1
LMO3Q8TAP4 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 C2orf27AP1-201ENST00000618128 586 ntBASIC14.42□□□□□ -0.1
LMO3Q8TAP4 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 PABPC1P2-201ENST00000471997 1805 ntBASIC14.42□□□□□ -0.1
LMO3Q8TAP4 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms