Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
O00370 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.53□□□□□ -0.08
O00370 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC14.52□□□□□ -0.08
O00370 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
O00370 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
O00370 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
O00370 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
O00370 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
O00370 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
O00370 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
O00370 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
O00370 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
O00370 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
O00370 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
O00370 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
O00370 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
O00370 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
O00370 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.52□□□□□ -0.09
O00370 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 ACTBP14-201ENST00000411655 1089 ntBASIC14.52□□□□□ -0.09
O00370 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.52□□□□□ -0.09
O00370 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.52□□□□□ -0.09
O00370 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.52□□□□□ -0.09
O00370 AC079250.1-201ENST00000456046 531 ntBASIC14.52□□□□□ -0.09
O00370 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.52□□□□□ -0.09
O00370 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC14.52□□□□□ -0.09
O00370 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
O00370 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.52□□□□□ -0.09
O00370 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.52□□□□□ -0.09
O00370 DNM1P30-201ENST00000563586 452 ntBASIC14.52□□□□□ -0.09
O00370 RN7SL556P-201ENST00000582856 298 ntBASIC14.52□□□□□ -0.09
O00370 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.52□□□□□ -0.09
O00370 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.52□□□□□ -0.09
O00370 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
O00370 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.52□□□□□ -0.09
O00370 AC018635.2-201ENST00000608625 364 ntBASIC14.52□□□□□ -0.09
O00370 AC073911.3-201ENST00000624401 631 ntBASIC14.52□□□□□ -0.09
O00370 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
O00370 AL022323.5-201ENST00000624101 2059 ntBASIC14.52□□□□□ -0.09
O00370 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
O00370 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.52□□□□□ -0.09
O00370 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.52□□□□□ -0.09
O00370 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
O00370 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
O00370 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
O00370 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
O00370 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.51□□□□□ -0.09
O00370 CICP1-201ENST00000416803 2410 ntBASIC14.51□□□□□ -0.09
O00370 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
O00370 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 TUBB2BP1-201ENST00000404155 871 ntBASIC14.51□□□□□ -0.09
O00370 HINT2P1-201ENST00000419438 481 ntBASIC14.51□□□□□ -0.09
O00370 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.51□□□□□ -0.09
O00370 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.51□□□□□ -0.09
O00370 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.51□□□□□ -0.09
O00370 VENTXP3-201ENST00000546480 773 ntBASIC14.51□□□□□ -0.09
O00370 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.51□□□□□ -0.09
O00370 MIR3147-201ENST00000577811 66 ntBASIC14.51□□□□□ -0.09
O00370 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
O00370 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.51□□□□□ -0.09
O00370 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
O00370 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
O00370 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
O00370 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.51□□□□□ -0.09
O00370 AC060814.4-201ENST00000594169 2163 ntBASIC14.51□□□□□ -0.09
O00370 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.51□□□□□ -0.09
O00370 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.51□□□□□ -0.09
O00370 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.51□□□□□ -0.09
O00370 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms