Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 AC024293.1-201ENST00000467930 498 ntBASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 RN7SL357P-201ENST00000581065 298 ntBASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 AGGF1P10-201ENST00000635005 2191 ntBASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 AC010970.1-201ENST00000445125 1848 ntBASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 LINC02228-202ENST00000641261 2489 ntBASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 RNA5SP491-201ENST00000362936 118 ntBASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 HCG27-204ENST00000424675 895 ntTSL 3 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 LYPLA2P1-203ENST00000447689 696 ntBASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 AK2-208ENST00000487289 920 ntTSL 2 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 AL359219.1-201ENST00000556311 934 ntBASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 AL136982.5-201ENST00000605222 294 ntBASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHROOM3Q8TF72 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 AC103810.10-201ENST00000606504 343 ntBASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SHROOM3Q8TF72 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms