RNA–Protein interactions for RNA: ENST00000417112.1

LINP1-201, Transcript of lncRNA in non-homologous end joining pathway 1, humanhuman

TSL 2 BASIC

Gene LINP1, Length 917 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINP1-201ENST00000417112 NISCHQ9Y2I1 1504 aa33.12■■■□□ 2.89
LINP1-201ENST00000417112 CCDC180Q9P1Z9 1646 aa29.41■■■□□ 2.3
LINP1-201ENST00000417112 ABCC9O60706 1549 aa28.61■■■□□ 2.17
LINP1-201ENST00000417112 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.01
LINP1-201ENST00000417112 NACADO15069 1562 aa27.6■■■□□ 2.01
LINP1-201ENST00000417112 RB1CC1Q8TDY2 1594 aa27.59■■■□□ 2.01
LINP1-201ENST00000417112 DCAF8L2P0C7V8 631 aa27.5■■□□□ 1.99
LINP1-201ENST00000417112 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
LINP1-201ENST00000417112 DCAF1Q9Y4B6 1507 aa27.42■■□□□ 1.98
LINP1-201ENST00000417112 UNC13AQ9UPW8 1703 aa27■■□□□ 1.91
LINP1-201ENST00000417112 SCRIBQ14160 1630 aa26.83■■□□□ 1.88
LINP1-201ENST00000417112 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
LINP1-201ENST00000417112 PABPN1Q86U42 306 aaKnown RBP eCLIP26.73■■□□□ 1.87
LINP1-201ENST00000417112 SHROOM4Q9ULL8 1493 aa26.51■■□□□ 1.83
LINP1-201ENST00000417112 DNAJC5BQ9UF47 199 aa26.14■■□□□ 1.78
LINP1-201ENST00000417112 EIF4G1Q04637 1599 aaKnown RBP26.05■■□□□ 1.76
LINP1-201ENST00000417112 CC2D2AQ9P2K1 1620 aa25.91■■□□□ 1.74
LINP1-201ENST00000417112 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
LINP1-201ENST00000417112 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
LINP1-201ENST00000417112 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
LINP1-201ENST00000417112 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
LINP1-201ENST00000417112 ATAD2BQ9ULI0 1458 aa25.49■■□□□ 1.67
LINP1-201ENST00000417112 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
LINP1-201ENST00000417112 NCAPD3P42695 1498 aa25.46■■□□□ 1.67
LINP1-201ENST00000417112 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
LINP1-201ENST00000417112 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
LINP1-201ENST00000417112 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
LINP1-201ENST00000417112 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
LINP1-201ENST00000417112 WIZO95785 1651 aa25.26■■□□□ 1.63
LINP1-201ENST00000417112 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
LINP1-201ENST00000417112 NESP48681 1621 aa24.82■■□□□ 1.56
LINP1-201ENST00000417112 LAMC3Q9Y6N6 1575 aa24.77■■□□□ 1.56
LINP1-201ENST00000417112 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.55
LINP1-201ENST00000417112 CCDC88BA6NC98 1476 aa24.69■■□□□ 1.54
LINP1-201ENST00000417112 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
LINP1-201ENST00000417112 ERCC6Q03468 1493 aa24.64■■□□□ 1.53
LINP1-201ENST00000417112 CFTRP13569 1480 aa24.61■■□□□ 1.53
LINP1-201ENST00000417112 PDS5BQ9NTI5 1447 aa24.57■■□□□ 1.52
LINP1-201ENST00000417112 KIF21AQ7Z4S6 1674 aa24.54■■□□□ 1.52
LINP1-201ENST00000417112 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
LINP1-201ENST00000417112 THOC2Q8NI27 1593 aaKnown RBP24.45■■□□□ 1.5
LINP1-201ENST00000417112 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
LINP1-201ENST00000417112 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
LINP1-201ENST00000417112 CUX2O14529 1486 aa24.36■■□□□ 1.49
LINP1-201ENST00000417112 MRC2Q9UBG0 1479 aa24.34■■□□□ 1.49
LINP1-201ENST00000417112 WDR62O43379 1518 aa24.28■■□□□ 1.48
LINP1-201ENST00000417112 URB2Q14146 1524 aaKnown RBP24.2■■□□□ 1.47
LINP1-201ENST00000417112 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
LINP1-201ENST00000417112 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
LINP1-201ENST00000417112 ABCC8Q09428 1581 aa24.04■■□□□ 1.44
LINP1-201ENST00000417112 CUX1P39880 1505 aa23.94■■□□□ 1.42
LINP1-201ENST00000417112 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
LINP1-201ENST00000417112 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
LINP1-201ENST00000417112 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
LINP1-201ENST00000417112 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
LINP1-201ENST00000417112 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.4
LINP1-201ENST00000417112 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
LINP1-201ENST00000417112 BIVM-ERCC5R4GMW8 1640 aa23.78■■□□□ 1.4
LINP1-201ENST00000417112 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
LINP1-201ENST00000417112 ZNF608Q9ULD9 1512 aaPredicted RBP23.77■■□□□ 1.4
LINP1-201ENST00000417112 RAD54L2Q9Y4B4 1467 aa23.76■■□□□ 1.39
LINP1-201ENST00000417112 SOGA1O94964 1423 aa23.74■■□□□ 1.39
LINP1-201ENST00000417112 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
LINP1-201ENST00000417112 WDR97A6NE52 1622 aa23.67■■□□□ 1.38
LINP1-201ENST00000417112 AQRO60306 1485 aaKnown RBP eCLIP23.62■■□□□ 1.37
LINP1-201ENST00000417112 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
LINP1-201ENST00000417112 TDRD9Q8NDG6 1382 aaKnown RBP23.6■■□□□ 1.37
LINP1-201ENST00000417112 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
LINP1-201ENST00000417112 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
LINP1-201ENST00000417112 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
LINP1-201ENST00000417112 PBRM1Q86U86 1689 aa23.46■■□□□ 1.35
LINP1-201ENST00000417112 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
LINP1-201ENST00000417112 DNAJC5Q9H3Z4 198 aa23.42■■□□□ 1.34
LINP1-201ENST00000417112 MAGI1Q96QZ7 1491 aaPredicted RBP23.4■■□□□ 1.34
LINP1-201ENST00000417112 CHD1O14646 1710 aa23.36■■□□□ 1.33
LINP1-201ENST00000417112 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.32
LINP1-201ENST00000417112 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
LINP1-201ENST00000417112 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
LINP1-201ENST00000417112 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
LINP1-201ENST00000417112 KIF27Q86VH2 1401 aa23.29■■□□□ 1.32
LINP1-201ENST00000417112 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
LINP1-201ENST00000417112 FBLN2P98095 1184 aa23.26■■□□□ 1.31
LINP1-201ENST00000417112 CHMP7Q8WUX9 453 aaPredicted RBP23.23■■□□□ 1.31
LINP1-201ENST00000417112 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
LINP1-201ENST00000417112 IGF1RP08069 1367 aa23.19■■□□□ 1.3
LINP1-201ENST00000417112 GRIN2AQ12879 1464 aa23.17■■□□□ 1.3
LINP1-201ENST00000417112 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
LINP1-201ENST00000417112 CUL7Q14999 1698 aa23.15■■□□□ 1.3
LINP1-201ENST00000417112 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
LINP1-201ENST00000417112 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
LINP1-201ENST00000417112 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
LINP1-201ENST00000417112 NUP160Q12769 1436 aa23.08■■□□□ 1.29
LINP1-201ENST00000417112 CEP170Q5SW79 1584 aa23.08■■□□□ 1.29
LINP1-201ENST00000417112 CARMIL1Q5VZK9 1371 aa23.04■■□□□ 1.28
LINP1-201ENST00000417112 ARHGEF11O15085 1522 aa23■■□□□ 1.27
LINP1-201ENST00000417112 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
LINP1-201ENST00000417112 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
LINP1-201ENST00000417112 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
LINP1-201ENST00000417112 RAPGEF2Q9Y4G8 1499 aa22.93■■□□□ 1.26
LINP1-201ENST00000417112 EEA1Q15075 1411 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms