RNA–Protein interactions for RNA: ENST00000641261.1

LINC02228-202, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-202ENST00000641261 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
LINC02228-202ENST00000641261 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
LINC02228-202ENST00000641261 ZCCHC6Q5VYS8 1495 aaKnown RBP24.53■■□□□ 1.52
LINC02228-202ENST00000641261 SHROOM4Q9ULL8 1493 aa24.33■■□□□ 1.49
LINC02228-202ENST00000641261 DCAF8L2P0C7V8 631 aa24.02■■□□□ 1.44
LINC02228-202ENST00000641261 DCAF1Q9Y4B6 1507 aa23.9■■□□□ 1.42
LINC02228-202ENST00000641261 SUPT5HO00267 1087 aaKnown RBP23.62■■□□□ 1.37
LINC02228-202ENST00000641261 ABCC9O60706 1549 aa23.39■■□□□ 1.33
LINC02228-202ENST00000641261 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
LINC02228-202ENST00000641261 SCRIBQ14160 1630 aa23.28■■□□□ 1.32
LINC02228-202ENST00000641261 NACADO15069 1562 aa23.16■■□□□ 1.3
LINC02228-202ENST00000641261 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
LINC02228-202ENST00000641261 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
LINC02228-202ENST00000641261 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
LINC02228-202ENST00000641261 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
LINC02228-202ENST00000641261 UNC13AQ9UPW8 1703 aa22.61■■□□□ 1.21
LINC02228-202ENST00000641261 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
LINC02228-202ENST00000641261 WIZO95785 1651 aa22.45■■□□□ 1.18
LINC02228-202ENST00000641261 BAZ1AQ9NRL2 1556 aaPredicted RBP22.37■■□□□ 1.17
LINC02228-202ENST00000641261 BICRAQ9NZM4 1560 aa22.29■■□□□ 1.16
LINC02228-202ENST00000641261 SMARCA4P51532 1647 aa22.26■■□□□ 1.15
LINC02228-202ENST00000641261 PABPN1Q86U42 306 aaKnown RBP eCLIP22.2■■□□□ 1.14
LINC02228-202ENST00000641261 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
LINC02228-202ENST00000641261 LOC105371045A0A1W2PR82 267 aa22.07■■□□□ 1.12
LINC02228-202ENST00000641261 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
LINC02228-202ENST00000641261 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
LINC02228-202ENST00000641261 SMARCA2P51531 1590 aa21.96■■□□□ 1.11
LINC02228-202ENST00000641261 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
LINC02228-202ENST00000641261 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
LINC02228-202ENST00000641261 FAM9AQ8IZU1 332 aaPredicted RBP21.82■■□□□ 1.08
LINC02228-202ENST00000641261 ABCC8Q09428 1581 aa21.76■■□□□ 1.07
LINC02228-202ENST00000641261 ATAD2BQ9ULI0 1458 aa21.75■■□□□ 1.07
LINC02228-202ENST00000641261 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
LINC02228-202ENST00000641261 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
LINC02228-202ENST00000641261 PCGF6Q9BYE7 350 aa21.61■■□□□ 1.05
LINC02228-202ENST00000641261 SOGA1O94964 1423 aa21.43■■□□□ 1.02
LINC02228-202ENST00000641261 WRNQ14191 1432 aaPredicted RBP eCLIP21.43■■□□□ 1.02
LINC02228-202ENST00000641261 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
LINC02228-202ENST00000641261 NCAPD3P42695 1498 aa21.4■■□□□ 1.02
LINC02228-202ENST00000641261 SYNJ1O43426 1573 aa21.39■■□□□ 1.02
LINC02228-202ENST00000641261 RUSC2Q8N2Y8 1516 aa21.36■■□□□ 1.01
LINC02228-202ENST00000641261 HRCP23327 699 aa21.33■■□□□ 1.01
LINC02228-202ENST00000641261 TRIM26Q12899 539 aaPredicted RBP21.32■■□□□ 1
LINC02228-202ENST00000641261 EEA1Q15075 1411 aa21.27■■□□□ 1
LINC02228-202ENST00000641261 CSRNP3Q8WYN3 585 aa21.22■□□□□ 0.99
LINC02228-202ENST00000641261 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
LINC02228-202ENST00000641261 BIVM-ERCC5R4GMW8 1640 aa21.14■□□□□ 0.97
LINC02228-202ENST00000641261 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
LINC02228-202ENST00000641261 CC2D2AQ9P2K1 1620 aa21.12■□□□□ 0.97
LINC02228-202ENST00000641261 TNIKQ9UKE5 1360 aa21.12■□□□□ 0.97
LINC02228-202ENST00000641261 CFTRP13569 1480 aa21.12■□□□□ 0.97
LINC02228-202ENST00000641261 GOLGA3Q08378 1498 aa21.1■□□□□ 0.97
LINC02228-202ENST00000641261 PPARGC1BQ86YN6 1023 aaKnown RBP21.07■□□□□ 0.96
LINC02228-202ENST00000641261 KIF21BO75037 1637 aa21.06■□□□□ 0.96
LINC02228-202ENST00000641261 UBTFP17480 764 aaKnown RBP21.05■□□□□ 0.96
LINC02228-202ENST00000641261 PRDM2Q13029 1718 aa21.05■□□□□ 0.96
LINC02228-202ENST00000641261 CUX1P39880 1505 aa21.04■□□□□ 0.96
LINC02228-202ENST00000641261 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
LINC02228-202ENST00000641261 RAPGEF2Q9Y4G8 1499 aa20.95■□□□□ 0.94
LINC02228-202ENST00000641261 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
LINC02228-202ENST00000641261 CLIP1P30622 1438 aa20.82■□□□□ 0.92
LINC02228-202ENST00000641261 TTBK1Q5TCY1 1321 aaPredicted RBP20.82■□□□□ 0.92
LINC02228-202ENST00000641261 PRXQ9BXM0 1461 aa20.81■□□□□ 0.92
LINC02228-202ENST00000641261 ERICH3Q5RHP9 1530 aa20.79■□□□□ 0.92
LINC02228-202ENST00000641261 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
LINC02228-202ENST00000641261 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
LINC02228-202ENST00000641261 NESP48681 1621 aa20.74■□□□□ 0.91
LINC02228-202ENST00000641261 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
LINC02228-202ENST00000641261 RANGAP1P46060 587 aaPredicted RBP20.72■□□□□ 0.91
LINC02228-202ENST00000641261 VPS8Q8N3P4 1428 aa20.7■□□□□ 0.9
LINC02228-202ENST00000641261 CUX2O14529 1486 aa20.69■□□□□ 0.9
LINC02228-202ENST00000641261 ZEB1P37275 1124 aaPredicted RBP20.63■□□□□ 0.89
LINC02228-202ENST00000641261 DNAJC5BQ9UF47 199 aa20.62■□□□□ 0.89
LINC02228-202ENST00000641261 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
LINC02228-202ENST00000641261 IGF1RP08069 1367 aa20.59■□□□□ 0.89
LINC02228-202ENST00000641261 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
LINC02228-202ENST00000641261 TOPBP1Q92547 1522 aa20.58■□□□□ 0.89
LINC02228-202ENST00000641261 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
LINC02228-202ENST00000641261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
LINC02228-202ENST00000641261 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
LINC02228-202ENST00000641261 RAD54L2Q9Y4B4 1467 aa20.54■□□□□ 0.88
LINC02228-202ENST00000641261 URB2Q14146 1524 aaKnown RBP20.49■□□□□ 0.87
LINC02228-202ENST00000641261 CARMIL1Q5VZK9 1371 aa20.49■□□□□ 0.87
LINC02228-202ENST00000641261 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
LINC02228-202ENST00000641261 ARHGAP35Q9NRY4 1499 aa20.47■□□□□ 0.87
LINC02228-202ENST00000641261 APLP2Q06481 763 aa20.47■□□□□ 0.87
LINC02228-202ENST00000641261 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
LINC02228-202ENST00000641261 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
LINC02228-202ENST00000641261 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
LINC02228-202ENST00000641261 PDS5BQ9NTI5 1447 aa20.41■□□□□ 0.86
LINC02228-202ENST00000641261 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
LINC02228-202ENST00000641261 CUL7Q14999 1698 aa20.34■□□□□ 0.85
LINC02228-202ENST00000641261 HNRNPUL2Q1KMD3 747 aaKnown RBP20.32■□□□□ 0.84
LINC02228-202ENST00000641261 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
LINC02228-202ENST00000641261 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
LINC02228-202ENST00000641261 CTTNBP2Q8WZ74 1663 aa20.26■□□□□ 0.83
LINC02228-202ENST00000641261 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
LINC02228-202ENST00000641261 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
LINC02228-202ENST00000641261 TIAM1Q13009 1591 aa20.2■□□□□ 0.82
LINC02228-202ENST00000641261 PCF11O94913 1555 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms