Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC14.87□□□□□ -0.03
VTNP04004 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VTNP04004 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
VTNP04004 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VTNP04004 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VTNP04004 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.87□□□□□ -0.03
VTNP04004 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC14.87□□□□□ -0.03
VTNP04004 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC14.87□□□□□ -0.03
VTNP04004 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.87□□□□□ -0.03
VTNP04004 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.87□□□□□ -0.03
VTNP04004 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VTNP04004 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
VTNP04004 CA6-205ENST00000480186 1493 ntTSL 2 BASIC14.87□□□□□ -0.03
VTNP04004 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.87□□□□□ -0.03
VTNP04004 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
VTNP04004 AC108024.1-201ENST00000626286 1721 ntBASIC14.86□□□□□ -0.03
VTNP04004 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VTNP04004 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VTNP04004 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.86□□□□□ -0.03
VTNP04004 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
VTNP04004 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.86□□□□□ -0.03
VTNP04004 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 AC012358.2-201ENST00000430010 1434 ntBASIC14.86□□□□□ -0.03
VTNP04004 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC14.86□□□□□ -0.03
VTNP04004 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VTNP04004 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.86□□□□□ -0.03
VTNP04004 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.86□□□□□ -0.03
VTNP04004 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.86□□□□□ -0.03
VTNP04004 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
VTNP04004 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC14.86□□□□□ -0.03
VTNP04004 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC14.86□□□□□ -0.03
VTNP04004 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.86□□□□□ -0.03
VTNP04004 PHBP10-201ENST00000416467 784 ntBASIC14.86□□□□□ -0.03
VTNP04004 AC010086.2-201ENST00000428616 226 ntBASIC14.86□□□□□ -0.03
VTNP04004 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.86□□□□□ -0.03
VTNP04004 AC133141.1-201ENST00000443015 339 ntBASIC14.86□□□□□ -0.03
VTNP04004 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.86□□□□□ -0.03
VTNP04004 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC14.86□□□□□ -0.03
VTNP04004 RNA5SP420-201ENST00000516997 137 ntBASIC14.86□□□□□ -0.03
VTNP04004 SRPK2P-201ENST00000523408 1100 ntBASIC14.86□□□□□ -0.03
VTNP04004 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.86□□□□□ -0.03
VTNP04004 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC14.86□□□□□ -0.03
VTNP04004 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.86□□□□□ -0.03
VTNP04004 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
VTNP04004 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.86□□□□□ -0.03
VTNP04004 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
VTNP04004 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 AC130686.1-201ENST00000622936 2466 ntBASIC14.86□□□□□ -0.03
VTNP04004 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VTNP04004 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VTNP04004 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.85□□□□□ -0.03
VTNP04004 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC14.85□□□□□ -0.03
VTNP04004 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VTNP04004 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.85□□□□□ -0.03
VTNP04004 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.85□□□□□ -0.03
VTNP04004 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms