Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC15.27■□□□□ 0.04
TRIM17Q9Y577 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRIM17Q9Y577 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC15.27■□□□□ 0.04
TRIM17Q9Y577 PAX6-247ENST00000638965 979 ntTSL 5 BASIC15.27■□□□□ 0.04
TRIM17Q9Y577 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 MTHFR-210ENST00000641407 2387 ntBASIC15.27■□□□□ 0.03
TRIM17Q9Y577 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 USP8-219ENST00000625664 1568 ntTSL 5 BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM17Q9Y577 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 MKRN7P-201ENST00000433469 1371 ntBASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AC034205.3-201ENST00000603595 1376 ntBASIC15.26■□□□□ 0.03
TRIM17Q9Y577 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 TPM3P7-201ENST00000338274 732 ntBASIC15.26■□□□□ 0.03
TRIM17Q9Y577 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AC004884.1-201ENST00000393647 319 ntBASIC15.26■□□□□ 0.03
TRIM17Q9Y577 SNORD23-201ENST00000408876 110 ntBASIC15.26■□□□□ 0.03
TRIM17Q9Y577 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 BICD1P1-201ENST00000457832 1222 ntBASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AC012100.1-201ENST00000470304 282 ntBASIC15.26■□□□□ 0.03
TRIM17Q9Y577 SAA2-206ENST00000530400 323 ntTSL 3 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AC090616.6-202ENST00000583601 1088 ntBASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AC211476.2-201ENST00000608799 708 ntBASIC15.26■□□□□ 0.03
TRIM17Q9Y577 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 MIR600HG-201ENST00000449175 5984 ntBASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRIM17Q9Y577 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 BX640514.1-201ENST00000583223 1918 ntBASIC15.25■□□□□ 0.03
TRIM17Q9Y577 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM17Q9Y577 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms