RNA–Protein interactions for RNA: ENST00000338274.4

TPM3P7-201, Transcript of tropomyosin 3 pseudogene 7, humanhuman

BASIC

Gene TPM3P7, Length 732 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P7-201ENST00000338274 NISCHQ9Y2I1 1504 aa30.6■■■□□ 2.49
TPM3P7-201ENST00000338274 CCDC180Q9P1Z9 1646 aa27.62■■■□□ 2.01
TPM3P7-201ENST00000338274 ABCC9O60706 1549 aa27.52■■■□□ 2
TPM3P7-201ENST00000338274 RB1CC1Q8TDY2 1594 aa26.26■■□□□ 1.79
TPM3P7-201ENST00000338274 NACADO15069 1562 aa26.06■■□□□ 1.76
TPM3P7-201ENST00000338274 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
TPM3P7-201ENST00000338274 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
TPM3P7-201ENST00000338274 DCAF8L2P0C7V8 631 aa25.7■■□□□ 1.7
TPM3P7-201ENST00000338274 MYO15BQ96JP2 1530 aa25.69■■□□□ 1.7
TPM3P7-201ENST00000338274 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
TPM3P7-201ENST00000338274 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
TPM3P7-201ENST00000338274 ZCCHC6Q5VYS8 1495 aaKnown RBP25.36■■□□□ 1.65
TPM3P7-201ENST00000338274 DCAF1Q9Y4B6 1507 aa25.32■■□□□ 1.64
TPM3P7-201ENST00000338274 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
TPM3P7-201ENST00000338274 SCRIBQ14160 1630 aa25.05■■□□□ 1.6
TPM3P7-201ENST00000338274 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
TPM3P7-201ENST00000338274 EIF4G1Q04637 1599 aaKnown RBP24.85■■□□□ 1.57
TPM3P7-201ENST00000338274 CECR2Q9BXF3 1484 aa24.82■■□□□ 1.56
TPM3P7-201ENST00000338274 NCAPD3P42695 1498 aa24■■□□□ 1.43
TPM3P7-201ENST00000338274 SMARCA4P51532 1647 aa23.93■■□□□ 1.42
TPM3P7-201ENST00000338274 ATAD2BQ9ULI0 1458 aa23.92■■□□□ 1.42
TPM3P7-201ENST00000338274 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
TPM3P7-201ENST00000338274 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
TPM3P7-201ENST00000338274 CUX2O14529 1486 aa23.81■■□□□ 1.4
TPM3P7-201ENST00000338274 DNAJC5Q9H3Z4 198 aa23.8■■□□□ 1.4
TPM3P7-201ENST00000338274 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
TPM3P7-201ENST00000338274 ERCC6Q03468 1493 aa23.78■■□□□ 1.4
TPM3P7-201ENST00000338274 PEG3Q9GZU2 1588 aa23.72■■□□□ 1.39
TPM3P7-201ENST00000338274 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
TPM3P7-201ENST00000338274 NESP48681 1621 aa23.62■■□□□ 1.37
TPM3P7-201ENST00000338274 MROH2BQ7Z745 1585 aa23.56■■□□□ 1.36
TPM3P7-201ENST00000338274 LAMC3Q9Y6N6 1575 aa23.54■■□□□ 1.36
TPM3P7-201ENST00000338274 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
TPM3P7-201ENST00000338274 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
TPM3P7-201ENST00000338274 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
TPM3P7-201ENST00000338274 WIZO95785 1651 aa23.32■■□□□ 1.32
TPM3P7-201ENST00000338274 CADPSQ9ULU8 1353 aa23.25■■□□□ 1.31
TPM3P7-201ENST00000338274 MRC2Q9UBG0 1479 aa23.16■■□□□ 1.3
TPM3P7-201ENST00000338274 WDR62O43379 1518 aa23.14■■□□□ 1.3
TPM3P7-201ENST00000338274 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
TPM3P7-201ENST00000338274 TOP2AP11388 1531 aaKnown RBP23.02■■□□□ 1.28
TPM3P7-201ENST00000338274 RSF1Q96T23 1441 aaPredicted RBP23.01■■□□□ 1.27
TPM3P7-201ENST00000338274 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
TPM3P7-201ENST00000338274 CFTRP13569 1480 aa22.99■■□□□ 1.27
TPM3P7-201ENST00000338274 PRDM2Q13029 1718 aa22.95■■□□□ 1.26
TPM3P7-201ENST00000338274 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
TPM3P7-201ENST00000338274 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
TPM3P7-201ENST00000338274 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
TPM3P7-201ENST00000338274 OSCARQ8IYS5 282 aa22.62■■□□□ 1.21
TPM3P7-201ENST00000338274 IFT140Q96RY7 1462 aa22.59■■□□□ 1.21
TPM3P7-201ENST00000338274 TOPBP1Q92547 1522 aa22.57■■□□□ 1.2
TPM3P7-201ENST00000338274 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
TPM3P7-201ENST00000338274 ZNF608Q9ULD9 1512 aaPredicted RBP22.52■■□□□ 1.2
TPM3P7-201ENST00000338274 DNMBPQ6XZF7 1577 aa22.52■■□□□ 1.2
TPM3P7-201ENST00000338274 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
TPM3P7-201ENST00000338274 RIMBP3CA6NJZ7 1639 aa22.45■■□□□ 1.18
TPM3P7-201ENST00000338274 RIMBP3BA6NNM3 1639 aa22.45■■□□□ 1.18
TPM3P7-201ENST00000338274 RIMBP3Q9UFD9 1639 aa22.45■■□□□ 1.18
TPM3P7-201ENST00000338274 TARBP1Q13395 1621 aaKnown RBP22.42■■□□□ 1.18
TPM3P7-201ENST00000338274 CHD1O14646 1710 aa22.37■■□□□ 1.17
TPM3P7-201ENST00000338274 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
TPM3P7-201ENST00000338274 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.16
TPM3P7-201ENST00000338274 AQRO60306 1485 aaKnown RBP eCLIP22.29■■□□□ 1.16
TPM3P7-201ENST00000338274 WDR97A6NE52 1622 aa22.24■■□□□ 1.15
TPM3P7-201ENST00000338274 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
TPM3P7-201ENST00000338274 SOGA1O94964 1423 aa22.19■■□□□ 1.14
TPM3P7-201ENST00000338274 FGD5Q6ZNL6 1462 aa22.18■■□□□ 1.14
TPM3P7-201ENST00000338274 CUX1P39880 1505 aa22.16■■□□□ 1.14
TPM3P7-201ENST00000338274 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
TPM3P7-201ENST00000338274 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
TPM3P7-201ENST00000338274 FBLN2P98095 1184 aa22.1■■□□□ 1.13
TPM3P7-201ENST00000338274 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
TPM3P7-201ENST00000338274 MAGI1Q96QZ7 1491 aaPredicted RBP22.08■■□□□ 1.12
TPM3P7-201ENST00000338274 CYB5RLQ6IPT4 315 aa22.07■■□□□ 1.12
TPM3P7-201ENST00000338274 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
TPM3P7-201ENST00000338274 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
TPM3P7-201ENST00000338274 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
TPM3P7-201ENST00000338274 GRIN2BQ13224 1484 aa22.04■■□□□ 1.12
TPM3P7-201ENST00000338274 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
TPM3P7-201ENST00000338274 ABCA5Q8WWZ7 1642 aa21.96■■□□□ 1.11
TPM3P7-201ENST00000338274 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
TPM3P7-201ENST00000338274 GAPVD1Q14C86 1478 aa21.95■■□□□ 1.1
TPM3P7-201ENST00000338274 ABCA10Q8WWZ4 1543 aa21.94■■□□□ 1.1
TPM3P7-201ENST00000338274 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
TPM3P7-201ENST00000338274 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
TPM3P7-201ENST00000338274 TRHP20396 242 aaPredicted RBP21.84■■□□□ 1.09
TPM3P7-201ENST00000338274 TOP2BQ02880 1626 aa21.82■■□□□ 1.08
TPM3P7-201ENST00000338274 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
TPM3P7-201ENST00000338274 ADAMTS12P58397 1594 aa21.79■■□□□ 1.08
TPM3P7-201ENST00000338274 GRIN2AQ12879 1464 aa21.77■■□□□ 1.07
TPM3P7-201ENST00000338274 CEP170Q5SW79 1584 aa21.71■■□□□ 1.07
TPM3P7-201ENST00000338274 NUP160Q12769 1436 aa21.7■■□□□ 1.06
TPM3P7-201ENST00000338274 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
TPM3P7-201ENST00000338274 SHROOM2Q13796 1616 aa21.68■■□□□ 1.06
TPM3P7-201ENST00000338274 ERCC6L2Q5T890 1561 aa21.67■■□□□ 1.06
TPM3P7-201ENST00000338274 FHAD1B1AJZ9 1412 aa21.66■■□□□ 1.06
TPM3P7-201ENST00000338274 RUSC2Q8N2Y8 1516 aa21.49■■□□□ 1.03
TPM3P7-201ENST00000338274 KIF13AQ9H1H9 1805 aa21.47■■□□□ 1.03
TPM3P7-201ENST00000338274 PRG4Q92954 1404 aaPredicted RBP21.45■■□□□ 1.02
TPM3P7-201ENST00000338274 JPH4Q96JJ6 628 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms