Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AL353622.2-201ENST00000605846 425 ntBASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 AL109954.3-201ENST00000615088 558 ntBASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 AC138627.1-201ENST00000641127 1257 ntBASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 AC011239.2-201ENST00000624820 1489 ntBASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 POP5-201ENST00000341039 913 ntTSL 2 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 RN7SL794P-201ENST00000469816 280 ntBASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 AC104115.1-201ENST00000484005 623 ntBASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 AC022447.5-201ENST00000504817 392 ntBASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 CCNL2P1-201ENST00000512846 969 ntBASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 AC117500.5-201ENST00000623233 527 ntBASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LYSMD4Q5XG99 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 SBF1P1-201ENST00000444527 5631 ntBASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 MKRN7P-201ENST00000433469 1371 ntBASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 AKR1C6P-201ENST00000432950 983 ntBASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 RN7SL2-201ENST00000490232 300 ntBASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 RN7SL4P-201ENST00000584058 295 ntBASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 MIR6125-201ENST00000618986 96 ntBASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms