RNA–Protein interactions for RNA: ENST00000551171.5

RDH12-203, Transcript of retinol dehydrogenase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH12, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH12-203ENST00000551171 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
RDH12-203ENST00000551171 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
RDH12-203ENST00000551171 ABCC9O60706 1549 aa27.47■■□□□ 1.99
RDH12-203ENST00000551171 ZCCHC6Q5VYS8 1495 aaKnown RBP26.51■■□□□ 1.83
RDH12-203ENST00000551171 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
RDH12-203ENST00000551171 RB1CC1Q8TDY2 1594 aa26.4■■□□□ 1.82
RDH12-203ENST00000551171 NACADO15069 1562 aa26.37■■□□□ 1.81
RDH12-203ENST00000551171 MYO15BQ96JP2 1530 aa26.2■■□□□ 1.78
RDH12-203ENST00000551171 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
RDH12-203ENST00000551171 UNC13AQ9UPW8 1703 aa25.9■■□□□ 1.74
RDH12-203ENST00000551171 SCRIBQ14160 1630 aa25.7■■□□□ 1.7
RDH12-203ENST00000551171 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
RDH12-203ENST00000551171 BICRAQ9NZM4 1560 aa25.65■■□□□ 1.7
RDH12-203ENST00000551171 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.69
RDH12-203ENST00000551171 DNAJC5BQ9UF47 199 aa25.18■■□□□ 1.62
RDH12-203ENST00000551171 EIF4G1Q04637 1599 aaKnown RBP24.95■■□□□ 1.59
RDH12-203ENST00000551171 CC2D2AQ9P2K1 1620 aa24.85■■□□□ 1.57
RDH12-203ENST00000551171 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
RDH12-203ENST00000551171 SUPT5HO00267 1087 aaKnown RBP24.61■■□□□ 1.53
RDH12-203ENST00000551171 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
RDH12-203ENST00000551171 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
RDH12-203ENST00000551171 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.5
RDH12-203ENST00000551171 MROH2BQ7Z745 1585 aa24.41■■□□□ 1.5
RDH12-203ENST00000551171 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.49
RDH12-203ENST00000551171 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
RDH12-203ENST00000551171 NCAPD3P42695 1498 aa24.33■■□□□ 1.49
RDH12-203ENST00000551171 PEG3Q9GZU2 1588 aa24.28■■□□□ 1.48
RDH12-203ENST00000551171 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
RDH12-203ENST00000551171 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
RDH12-203ENST00000551171 WIZO95785 1651 aa24.18■■□□□ 1.46
RDH12-203ENST00000551171 TOP2AP11388 1531 aaKnown RBP23.93■■□□□ 1.42
RDH12-203ENST00000551171 NESP48681 1621 aa23.81■■□□□ 1.4
RDH12-203ENST00000551171 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
RDH12-203ENST00000551171 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
RDH12-203ENST00000551171 ERCC6Q03468 1493 aa23.64■■□□□ 1.38
RDH12-203ENST00000551171 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
RDH12-203ENST00000551171 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
RDH12-203ENST00000551171 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
RDH12-203ENST00000551171 CFTRP13569 1480 aa23.52■■□□□ 1.36
RDH12-203ENST00000551171 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.35
RDH12-203ENST00000551171 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
RDH12-203ENST00000551171 FANCD2Q9BXW9 1451 aa23.39■■□□□ 1.33
RDH12-203ENST00000551171 PRDM2Q13029 1718 aa23.39■■□□□ 1.33
RDH12-203ENST00000551171 CEP164Q9UPV0 1460 aa23.35■■□□□ 1.33
RDH12-203ENST00000551171 CUX2O14529 1486 aa23.34■■□□□ 1.33
RDH12-203ENST00000551171 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
RDH12-203ENST00000551171 WDR62O43379 1518 aa23.22■■□□□ 1.31
RDH12-203ENST00000551171 TRIM41Q8WV44 630 aa23.2■■□□□ 1.3
RDH12-203ENST00000551171 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
RDH12-203ENST00000551171 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
RDH12-203ENST00000551171 TOPBP1Q92547 1522 aa23.03■■□□□ 1.28
RDH12-203ENST00000551171 WRNQ14191 1432 aaPredicted RBP eCLIP23.02■■□□□ 1.28
RDH12-203ENST00000551171 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
RDH12-203ENST00000551171 CUX1P39880 1505 aa22.9■■□□□ 1.26
RDH12-203ENST00000551171 SYNJ1O43426 1573 aa22.89■■□□□ 1.26
RDH12-203ENST00000551171 TOP2BQ02880 1626 aa22.85■■□□□ 1.25
RDH12-203ENST00000551171 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
RDH12-203ENST00000551171 IFT140Q96RY7 1462 aa22.84■■□□□ 1.25
RDH12-203ENST00000551171 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
RDH12-203ENST00000551171 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
RDH12-203ENST00000551171 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
RDH12-203ENST00000551171 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
RDH12-203ENST00000551171 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.23
RDH12-203ENST00000551171 EEA1Q15075 1411 aa22.74■■□□□ 1.23
RDH12-203ENST00000551171 SOGA1O94964 1423 aa22.72■■□□□ 1.23
RDH12-203ENST00000551171 EIF4G3O43432 1585 aaKnown RBP22.7■■□□□ 1.22
RDH12-203ENST00000551171 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
RDH12-203ENST00000551171 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.22
RDH12-203ENST00000551171 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.21
RDH12-203ENST00000551171 WDR97A6NE52 1622 aa22.63■■□□□ 1.21
RDH12-203ENST00000551171 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
RDH12-203ENST00000551171 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
RDH12-203ENST00000551171 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
RDH12-203ENST00000551171 ABCA10Q8WWZ4 1543 aa22.55■■□□□ 1.2
RDH12-203ENST00000551171 CSRNP3Q8WYN3 585 aa22.54■■□□□ 1.2
RDH12-203ENST00000551171 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
RDH12-203ENST00000551171 GAPVD1Q14C86 1478 aa22.48■■□□□ 1.19
RDH12-203ENST00000551171 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
RDH12-203ENST00000551171 KIF27Q86VH2 1401 aa22.46■■□□□ 1.19
RDH12-203ENST00000551171 GRIN2BQ13224 1484 aa22.45■■□□□ 1.18
RDH12-203ENST00000551171 SNAPC4Q5SXM2 1469 aa22.44■■□□□ 1.18
RDH12-203ENST00000551171 CHD1O14646 1710 aa22.42■■□□□ 1.18
RDH12-203ENST00000551171 KIF21BO75037 1637 aa22.4■■□□□ 1.18
RDH12-203ENST00000551171 OSCARQ8IYS5 282 aa22.39■■□□□ 1.17
RDH12-203ENST00000551171 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
RDH12-203ENST00000551171 GOLGA3Q08378 1498 aa22.37■■□□□ 1.17
RDH12-203ENST00000551171 FBLN2P98095 1184 aa22.37■■□□□ 1.17
RDH12-203ENST00000551171 EHMT2Q96KQ7 1210 aa22.31■■□□□ 1.16
RDH12-203ENST00000551171 TNIKQ9UKE5 1360 aa22.3■■□□□ 1.16
RDH12-203ENST00000551171 PRXQ9BXM0 1461 aa22.3■■□□□ 1.16
RDH12-203ENST00000551171 SYNJ2O15056 1496 aa22.3■■□□□ 1.16
RDH12-203ENST00000551171 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
RDH12-203ENST00000551171 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
RDH12-203ENST00000551171 ADAMTS12P58397 1594 aa22.27■■□□□ 1.16
RDH12-203ENST00000551171 IGF1RP08069 1367 aa22.25■■□□□ 1.15
RDH12-203ENST00000551171 RAPGEF2Q9Y4G8 1499 aa22.23■■□□□ 1.15
RDH12-203ENST00000551171 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
RDH12-203ENST00000551171 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
RDH12-203ENST00000551171 GRIN2AQ12879 1464 aa22.18■■□□□ 1.14
RDH12-203ENST00000551171 CEP162Q5TB80 1403 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms